Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 2.6e-156 555.4 301 100.0
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 2.4e-117 426.0 304 78.9
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.5e-79 300.4 302 60.3
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 2.8e-78 296.2 296 59.1
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 9.2e-45 184.9 160 65.0
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 1.6e-41 174.1 305 43.0
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 1.1e-40 171.4 213 55.4
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 8.7e-35 151.8 233 48.1
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 4.0e-32 142.9 346 36.4
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 2.9e-30 136.7 278 39.9
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 1.9e-29 134.0 292 39.0
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 2.3e-27 127.1 160 50.6
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 4.5e-23 112.8 304 35.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.2e-14 84.0 97 50.5
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 2.9e-14 83.6 146 41.8
Medtr8g097140 Medicago truncatula HOM05D007431 ORTHO05D008438 2.9e-14 83.6 293 32.4
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 4.9e-14 82.8 97 50.5
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 2.5e-13 80.5 268 31.0
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 2.5e-13 80.5 71 69.0
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 2.5e-13 80.5 121 45.5
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 3.2e-13 80.1 82 57.3
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.6e-12 77.8 119 46.2
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 2.7e-12 77.0 94 51.1
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 2.7e-12 77.0 180 37.2
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 7.9e-12 75.5 306 30.7
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 7.9e-12 75.5 75 60.0
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 7.9e-12 75.5 116 45.7
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 1.8e-11 74.3 75 57.3
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 1.8e-11 74.3 125 44.0
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 3.0e-11 73.6 123 45.5
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 3.0e-11 73.6 117 40.2
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 3.0e-11 73.6 117 40.2
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 3.9e-11 73.2 80 51.2
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 3.9e-11 73.2 114 43.9
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 3.9e-11 73.2 86 54.7
Psat2g042560 Pisum sativum HOM05D007431 ORTHO05D008438 5.1e-11 72.8 56 73.2
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 6.7e-11 72.4 97 46.4
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 6.7e-11 72.4 220 32.3
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 8.7e-11 72.0 133 39.1
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 8.7e-11 72.0 223 32.3
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 8.7e-11 72.0 224 31.7
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 8.7e-11 72.0 237 31.6
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 8.7e-11 72.0 212 34.0
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.5e-10 71.2 231 31.6
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 2.5e-10 70.5 307 28.7
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 2.5e-10 70.5 226 30.5
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 5.6e-10 69.3 296 30.7
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 1.6e-09 67.8 145 35.9
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 2.8e-09 67.0 73 54.8
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 2.8e-09 67.0 88 45.5
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 2.8e-09 67.0 148 34.5
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 3.7e-09 66.6 90 45.6
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 3.7e-09 66.6 71 50.7
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 4.8e-09 66.2 63 55.6
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 4.8e-09 66.2 165 35.2
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 6.2e-09 65.9 86 51.2
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 6.2e-09 65.9 181 35.4
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 8.2e-09 65.5 81 46.9
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 1.4e-08 64.7 93 44.1
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.8e-08 64.3 113 38.9
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 2.4e-08 63.9 60 55.0
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 4.0e-08 63.2 220 31.4
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 4.0e-08 63.2 128 37.5
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 4.0e-08 63.2 91 45.1
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 5.3e-08 62.8 174 35.1
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 6.9e-08 62.4 69 50.7
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 6.9e-08 62.4 212 28.3
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 1.2e-07 61.6 95 45.3
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 1.2e-07 61.6 145 34.5
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 2.0e-07 60.8 101 40.6
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 2.6e-07 60.5 97 46.4
Haze_02139 Corylus avellana HOM05D023024 ORTHO05D008438 2.6e-07 60.5 306 28.8
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 2.6e-07 60.5 95 43.2
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 2.6e-07 60.5 148 31.1
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 3.4e-07 60.1 71 47.9
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 3.4e-07 60.1 87 44.8
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 4.5e-07 59.7 244 31.6
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 5.8e-07 59.3 96 40.6
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 7.6e-07 58.9 58 55.2
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 1.0e-06 58.5 101 44.6
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 1.0e-06 58.5 76 51.3
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 1.3e-06 58.2 85 42.4
Sed0014169 Sechium edule HOM05D007431 ORTHO05D008438 1.3e-06 58.2 82 50.0
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 1.7e-06 57.8 79 50.6
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.2e-06 57.4 77 48.1
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 2.2e-06 57.4 104 37.5
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 2.9e-06 57.0 61 52.5
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 2.9e-06 57.0 67 47.8
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.9e-06 57.0 81 48.1
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 3.8e-06 56.6 73 45.2
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 3.8e-06 56.6 73 45.2
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 3.8e-06 56.6 73 45.2
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 4.9e-06 56.2 289 30.4
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 4.9e-06 56.2 74 47.3
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 6.5e-06 55.8 198 27.3
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 8.4e-06 55.5 86 45.3
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 8.4e-06 55.5 99 39.4


User provided reference genes

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