Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 5.4e-119 431.0 221 100.0
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 2.1e-102 375.9 221 86.0
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 6.2e-99 364.4 226 83.6
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 2.7e-94 349.0 221 78.7
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 3.0e-93 345.5 221 79.2
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 6.7e-93 344.4 221 81.0
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.1e-92 343.6 219 78.5
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 9.0e-90 334.0 221 74.2
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 3.8e-88 328.6 222 73.9
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.7e-86 322.4 221 76.5
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 2.3e-85 319.3 221 72.4
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 9.0e-82 307.4 218 75.7
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 9.0e-82 307.4 220 72.3
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 2.6e-81 305.8 222 72.1
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 6.5e-80 301.2 216 73.1
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 6.5e-80 301.2 223 72.2
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 8.5e-80 300.8 220 70.9
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 2.5e-79 299.3 223 71.7
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 3.2e-79 298.9 213 74.2
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 7.2e-79 297.7 223 70.9
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 2.1e-78 296.2 218 73.9
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 2.1e-78 296.2 222 72.1
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 4.6e-78 295.0 223 70.4
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 4.6e-78 295.0 215 72.6
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 7.9e-78 294.3 222 70.7
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.4e-77 293.5 222 69.4
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.4e-77 293.5 220 72.7
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 3.0e-77 292.4 221 69.2
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 3.9e-77 292.0 221 69.2
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 3.9e-77 292.0 221 69.7
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 3.9e-77 292.0 223 71.3
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 3.9e-77 292.0 218 70.6
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 5.1e-77 291.6 222 71.6
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 6.7e-77 291.2 213 70.9
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 6.7e-77 291.2 245 64.5
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 8.8e-77 290.8 222 68.0
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 1.1e-76 290.4 222 67.1
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 1.5e-76 290.0 218 69.7
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 1.5e-76 290.0 220 68.6
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 2.0e-76 289.7 195 75.4
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 2.0e-76 289.7 218 70.2
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 4.3e-76 288.5 224 71.0
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 5.7e-76 288.1 221 68.3
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 5.7e-76 288.1 221 70.6
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 2.2e-75 286.2 222 66.7
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 6.9e-74 281.2 241 64.7
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 1.5e-73 280.0 218 67.9
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 2.6e-73 279.3 229 66.8
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 4.5e-73 278.5 220 67.3
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 7.7e-73 277.7 218 67.4
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 2.9e-72 275.8 221 65.2
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 5.0e-72 275.0 218 67.9
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 5.0e-72 275.0 218 67.0
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 6.5e-72 274.6 219 66.2
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 6.5e-72 274.6 222 65.8
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 8.5e-72 274.2 218 67.4
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.1e-71 273.9 221 66.1
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 1.1e-71 273.9 221 66.5
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 4.2e-71 271.9 218 66.5
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 7.2e-71 271.2 211 68.7
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.2e-70 270.4 223 67.3
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 8.8e-69 264.2 221 62.9
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.1e-68 263.8 222 62.2
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 2.6e-68 262.7 228 61.0
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 3.3e-68 262.3 220 64.5
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 3.7e-67 258.8 220 61.8
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 3.7e-67 258.8 218 64.7
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 6.3e-67 258.1 220 63.2
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 8.2e-67 257.7 171 76.0
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 5.3e-66 255.0 218 63.8
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 3.5e-65 252.3 224 63.8
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 7.7e-65 251.1 212 61.3
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 1.0e-64 250.8 187 67.4
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.3e-64 250.4 171 75.4
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 5.0e-64 248.4 171 72.5
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 5.0e-64 248.4 221 62.0
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.5e-63 246.1 218 62.8
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 7.2e-63 244.6 171 70.8
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 7.2e-63 244.6 193 66.8
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 1.4e-61 240.4 224 60.3
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 2.6e-60 236.1 174 68.4
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 3.7e-59 232.3 159 74.8
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 1.9e-55 219.9 155 75.5
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.4e-53 213.8 218 54.6
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 2.0e-52 209.9 227 52.4
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 4.4e-52 208.8 142 72.5
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 5.4e-50 201.8 219 51.6
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 1.5e-47 193.7 144 65.3
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 7.2e-47 191.4 158 69.6
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 3.1e-42 176.0 146 68.5
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 4.1e-42 175.6 146 67.8
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.7e-41 172.9 138 63.8
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 5.9e-41 171.8 218 48.2
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 2.0e-28 130.2 95 72.6
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.9e-24 115.9 80 77.5
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.9e-24 115.9 80 77.5
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 1.4e-21 107.5 217 36.4
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 8.9e-21 104.8 59 84.7
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 1.1e-18 97.8 58 84.5
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 3.6e-14 82.8 77 49.4
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 4.7e-14 82.4 153 38.6
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 1.3e-11 74.3 192 32.3
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.7e-11 73.9 77 53.2
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 5.6e-07 58.9 42 69.0


User provided reference genes

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