Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 2.4e-179 632.1 325 100.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 3.6e-135 485.3 314 78.0
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.1e-128 463.8 313 75.7
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 8.0e-127 457.6 323 73.1
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.0e-126 455.3 324 71.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 6.7e-126 454.5 311 74.0
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 5.7e-125 451.4 323 70.3
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 3.8e-121 438.7 318 72.6
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.0e-118 430.6 315 69.8
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.3e-113 413.7 316 68.0
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 2.7e-106 389.4 342 60.8
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.0e-105 387.5 331 61.6
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.3e-105 387.1 341 61.3
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.7e-105 386.7 328 60.4
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 5.0e-105 385.2 342 61.4
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.9e-104 383.3 341 61.3
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.5e-104 382.9 339 61.9
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.5e-104 382.9 331 59.5
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.6e-103 380.2 341 60.1
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 8.0e-103 377.9 327 60.9
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.8e-102 376.7 333 61.0
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.8e-102 376.7 332 60.2
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 4.0e-102 375.6 341 59.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.5e-101 373.6 343 59.5
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 2.0e-101 373.2 327 60.2
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.0e-101 373.2 341 58.1
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.4e-101 372.1 328 59.1
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.3e-100 370.5 332 60.8
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.7e-100 370.2 329 61.4
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.7e-100 370.2 333 61.3
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 3.7e-100 369.0 343 57.7
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 8.3e-100 367.9 332 58.7
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.4e-99 367.1 345 59.4
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.4e-99 367.1 332 60.2
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.2e-99 365.9 335 60.3
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 5.4e-99 365.2 341 57.2
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.0e-97 360.9 331 59.8
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 2.3e-97 359.8 339 56.9
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 5.0e-97 358.6 337 56.4
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 6.6e-97 358.2 336 57.1
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 1.9e-96 356.7 339 54.9
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 4.3e-96 355.5 337 56.1
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.2e-95 354.0 336 58.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 3.6e-95 352.4 333 57.7
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 3.6e-95 352.4 332 57.5
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.4e-94 350.5 332 56.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 5.2e-94 348.6 338 55.9
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 3.4e-93 345.9 340 56.8
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.3e-92 344.0 340 54.7
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.7e-92 342.4 323 54.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 8.3e-92 341.3 338 55.9
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.9e-91 340.1 342 55.3
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 3.2e-91 339.3 340 57.1
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 9.2e-91 337.8 324 53.4
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.6e-90 337.0 338 56.8
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 2.0e-90 336.7 329 56.8
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 4.6e-90 335.5 338 56.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 7.8e-90 334.7 322 53.1
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.7e-89 333.6 330 56.4
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.7e-89 333.6 338 53.8
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 8.6e-89 331.3 333 55.6
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.1e-88 330.9 345 55.4
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 3.3e-88 329.3 333 55.3
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 2.8e-87 326.2 330 52.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 8.1e-87 324.7 375 48.3
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.1e-86 324.3 326 54.9
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 3.1e-86 322.8 332 53.6
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 5.2e-86 322.0 330 53.9
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 6.8e-86 321.6 331 55.3
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.5e-85 320.5 324 54.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.9e-84 316.2 324 54.0
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.1e-83 314.3 324 53.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.4e-83 313.2 337 52.2
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 4.1e-83 312.4 345 52.2
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.1e-82 310.1 426 45.1
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.7e-81 307.0 275 60.7
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.3e-81 306.6 313 51.1
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.2e-79 300.8 274 59.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.1e-79 300.1 212 68.9
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 6.2e-79 298.5 315 51.1
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 4.0e-78 295.8 339 49.0
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 4.4e-77 292.4 327 51.7
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 6.4e-76 288.5 276 60.1
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 2.4e-75 286.6 260 56.9
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 3.2e-75 286.2 345 47.2
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 6.0e-74 282.0 343 47.2
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 3.3e-72 276.2 269 54.3
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.2e-71 274.2 212 61.8
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 4.7e-71 272.3 339 46.0
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.4e-70 270.0 330 46.7
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 8.4e-68 261.5 339 45.7
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 5.4e-59 232.3 229 56.3
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.5e-48 197.6 307 39.1
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.6e-47 194.1 257 47.5
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.6e-45 186.8 187 55.1
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 6.5e-36 155.6 242 37.6
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.5e-32 144.4 127 55.9
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.3e-31 141.4 188 40.4
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 3.7e-31 139.8 128 59.4
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.4e-30 137.9 157 47.1
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.4e-27 127.9 163 44.8
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 5.5e-27 125.9 127 56.7
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.7e-26 123.6 81 79.0
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.8e-25 120.9 104 61.5
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.1e-24 118.2 141 48.2
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.5e-24 117.9 161 42.9
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 9.7e-24 115.2 164 42.1
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.5e-21 107.8 159 37.1
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 7.2e-19 99.0 93 54.8
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 2.1e-18 97.4 95 55.8
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 9.7e-16 88.6 83 47.0
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 2.1e-10 70.9 74 52.7
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 3.3e-08 63.5 38 76.3
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 7.5e-08 62.4 66 47.0


User provided reference genes

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