Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 0.0e+00 1229.2 626 100.0
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 2.0e-283 978.8 635 83.6
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 3.4e-251 871.7 647 74.5
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 3.5e-195 685.6 504 74.4
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 2.6e-174 616.3 616 62.0
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 5.2e-159 565.5 600 60.3
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 8.7e-138 495.0 541 56.9
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.6e-107 394.4 611 47.5
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 8.2e-104 382.1 640 47.7
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 2.6e-89 334.0 638 42.8
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 2.8e-88 330.5 599 44.2
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 7.7e-78 295.8 594 41.9
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 2.5e-76 290.8 674 41.4
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 1.2e-73 282.0 495 41.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 2.3e-69 267.7 652 36.8
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.1e-68 265.4 611 38.5
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 2.6e-65 254.2 515 38.4
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 4.5e-62 243.4 579 35.9
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.3e-61 241.9 612 37.4
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.6e-61 239.2 609 37.6
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.0e-58 232.3 653 35.7
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.0e-58 232.3 618 35.9
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.6e-57 227.6 656 35.4
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 2.6e-57 227.6 613 36.9
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.7e-56 224.9 647 36.3
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 7.0e-55 219.5 589 38.9
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 7.0e-55 219.5 672 35.0
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.2e-54 218.8 609 36.5
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 2.0e-54 218.0 652 35.9
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 3.5e-54 217.2 307 48.9
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 5.0e-53 213.4 581 37.7
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 9.5e-52 209.1 569 35.5
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 9.2e-47 192.6 448 37.5
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 3.5e-46 190.7 517 35.8
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 6.6e-45 186.4 442 36.7
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 8.6e-45 186.0 634 33.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 9.5e-44 182.6 435 38.6
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 4.7e-43 180.3 650 33.8
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.1e-42 179.1 422 36.5
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 6.8e-42 176.4 522 33.7
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 6.8e-42 176.4 426 37.8
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.9e-40 171.0 710 29.9
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 4.9e-40 170.2 603 32.7
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 4.9e-40 170.2 430 35.1
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 8.3e-40 169.5 597 33.5
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.1e-39 169.1 490 33.1
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.4e-39 168.7 444 35.4
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.4e-39 168.7 648 29.8
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.9e-39 168.3 708 32.1
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.9e-39 168.3 726 30.0
Psat1g013640 Pisum sativum HOM05D006718 ORTHO05D008492 4.1e-39 167.2 635 32.9
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.2e-38 165.6 309 43.4
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.0e-37 162.5 489 32.9
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.3e-37 161.4 570 33.2
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 2.3e-37 161.4 489 32.9
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.1e-36 159.1 415 35.7
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 4.3e-36 157.1 633 30.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 5.6e-36 156.8 487 34.5
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.1e-35 154.8 606 32.8
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 4.7e-35 153.7 501 34.7
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 8.1e-35 152.9 539 33.2
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.8e-34 151.8 286 44.1
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.8e-34 149.8 589 32.9
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 8.9e-34 149.4 553 32.0
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 2.0e-33 148.3 395 34.4
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 5.8e-33 146.7 552 31.0
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.2e-32 144.8 451 32.8
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.9e-32 143.7 206 47.1
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.1e-31 140.6 479 32.2
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 4.1e-31 140.6 520 32.1
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 4.1e-31 140.6 622 30.9
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 5.4e-31 140.2 272 37.9
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 5.4e-31 140.2 400 34.5
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 7.1e-31 139.8 231 41.1
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.6e-30 138.7 448 32.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 7.8e-30 136.3 588 30.3
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.3e-29 135.6 662 29.8
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.7e-29 135.2 429 31.7
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.7e-29 135.2 616 31.5
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.7e-29 135.2 461 31.5
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.3e-29 134.8 416 33.2
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.0e-29 134.4 612 31.7
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 4.3e-28 130.6 524 31.5
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 7.3e-28 129.8 614 31.1
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 9.6e-28 129.4 674 29.2
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.2e-27 129.0 559 30.2
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.2e-27 129.0 312 35.6
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 1.6e-27 128.6 663 29.4
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 2.1e-27 128.3 610 31.3
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 2.1e-27 128.3 561 29.6
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 4.7e-27 127.1 427 33.5
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 6.9e-26 123.2 228 43.4
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 6.4e-24 116.7 567 31.2
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 8.4e-24 116.3 602 29.9
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.4e-23 113.6 674 29.8
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 5.4e-23 113.6 432 29.6
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.2e-22 112.5 435 32.6
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 2.3e-21 108.2 260 37.7
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.2e-19 100.1 618 27.3
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 1.2e-17 95.9 564 28.2
Psat2g067120 Pisum sativum HOM05D006718 ORTHO05D008492 1.2e-17 95.9 109 55.0
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 6.4e-16 90.1 429 30.5
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 4.2e-15 87.4 589 26.3
Psat2g100040 Pisum sativum HOM05D006718 ORTHO05D008492 1.3e-13 82.4 135 45.2
Psat0s1639g0200 Pisum sativum HOM05D006718 ORTHO05D008492 3.3e-12 77.8 74 63.5
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 3.7e-11 74.3 257 36.6
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 2.1e-06 58.5 186 30.1


User provided reference genes

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