Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 4.7e-73 277.7 134 100.0
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.8e-64 249.2 166 77.7
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.9e-59 231.9 134 83.6
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 5.5e-58 227.6 134 82.8
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 2.0e-55 219.2 138 76.1
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 1.3e-54 216.5 137 75.9
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.8e-53 212.6 139 74.1
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 3.1e-53 211.8 139 76.3
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 5.4e-53 211.1 136 75.7
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 5.4e-53 211.1 136 75.7
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 6.5e-51 204.1 134 73.9
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 6.5e-51 204.1 134 73.9
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 4.7e-49 198.0 131 73.3
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 6.1e-49 197.6 138 68.1
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 4.9e-46 188.0 137 68.6
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 8.3e-46 187.2 139 67.6
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 2.4e-45 185.7 146 65.8
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 3.1e-45 185.3 139 70.5
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.1e-45 184.9 137 67.9
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 1.2e-44 183.3 142 66.2
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.6e-44 183.0 137 67.2
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 2.0e-44 182.6 137 66.4
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.5e-44 181.8 137 66.4
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.3e-43 179.9 138 64.5
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 2.3e-43 179.1 136 66.9
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 3.8e-43 178.3 137 67.2
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 3.8e-43 178.3 140 65.0
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 3.8e-43 178.3 141 64.5
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 5.0e-43 177.9 137 65.7
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 6.6e-43 177.6 133 64.7
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 6.6e-43 177.6 137 66.4
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 8.6e-43 177.2 136 66.2
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.1e-42 176.8 135 65.2
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 1.1e-42 176.8 137 65.7
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.1e-42 176.8 138 65.2
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.9e-42 176.0 135 63.7
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.9e-42 176.0 141 64.5
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.5e-42 175.6 138 64.5
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 4.2e-42 174.9 135 64.4
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.1e-41 172.6 140 63.6
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.1e-41 172.6 140 63.6
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 2.1e-41 172.6 133 65.4
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 2.1e-41 172.6 135 64.4
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 6.1e-41 171.0 101 81.2
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 1.0e-40 170.2 136 61.8
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.4e-40 169.9 141 63.8
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.8e-40 169.5 139 63.3
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 2.3e-40 169.1 139 64.7
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 6.8e-40 167.5 143 59.4
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 6.8e-40 167.5 143 59.4
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 6.8e-40 167.5 143 59.4
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 8.9e-40 167.2 102 75.5
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.2e-39 166.8 102 73.5
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 2.6e-39 165.6 142 59.9
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 2.6e-39 165.6 142 59.9
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 2.6e-39 165.6 142 59.9
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 3.4e-39 165.2 146 58.2
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 3.4e-39 165.2 102 72.5
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 3.4e-39 165.2 116 69.0
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 5.7e-39 164.5 145 56.6
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 7.5e-39 164.1 146 58.2
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 9.8e-39 163.7 145 57.2
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 9.8e-39 163.7 143 57.3
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 9.8e-39 163.7 143 57.3
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.7e-38 162.9 142 59.2
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.7e-38 162.9 142 59.2
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.7e-38 162.9 148 56.8
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.7e-38 162.9 148 56.8
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 1.7e-38 162.9 137 63.5
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.2e-38 162.5 136 61.8
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 3.7e-38 161.8 147 56.5
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 4.9e-38 161.4 136 63.2
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 8.3e-38 160.6 99 77.8
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 1.4e-37 159.8 143 55.9
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 2.4e-37 159.1 134 59.7
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 2.4e-37 159.1 100 73.0
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 4.1e-37 158.3 97 74.2
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 5.4e-37 157.9 134 59.7
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 5.4e-37 157.9 138 58.7
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 7.0e-37 157.5 96 77.1
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 9.2e-37 157.1 128 56.2
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 9.2e-37 157.1 142 57.0
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 1.2e-36 156.8 121 63.6
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 1.2e-36 156.8 93 72.0
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.2e-36 156.8 135 57.0
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 1.6e-36 156.4 125 59.2
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 2.0e-36 156.0 142 57.7
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 2.0e-36 156.0 134 59.0
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 3.5e-36 155.2 99 68.7
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.0e-35 153.7 136 59.6
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.3e-35 153.3 139 58.3
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 1.7e-35 152.9 141 56.0
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.9e-35 152.1 139 58.3
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 3.9e-35 151.8 93 68.8
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 3.9e-35 151.8 93 71.0
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 5.0e-35 151.4 93 72.0
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 8.6e-35 150.6 135 58.5
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.1e-34 150.2 102 70.6
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.5e-34 149.8 102 70.6
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 1.5e-34 149.8 136 55.9
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 4.3e-34 148.3 134 57.5
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 9.5e-34 147.1 134 58.2
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 1.2e-33 146.7 93 68.8
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.7e-33 144.8 131 53.4
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 1.4e-32 143.3 99 67.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.8e-32 142.9 101 68.3
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.8e-32 142.9 101 68.3
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 6.8e-32 141.0 127 53.5
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 6.8e-32 141.0 127 54.3
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 9.8e-31 137.1 113 59.3
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.2e-28 130.2 103 60.2
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 1.3e-27 126.7 127 46.5
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 2.3e-27 125.9 76 77.6
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 5.0e-27 124.8 76 76.3
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 5.0e-27 124.8 129 50.4
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 3.3e-26 122.1 103 56.3
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 6.2e-25 117.9 95 57.9
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.1e-24 117.1 100 56.0
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 5.2e-24 114.8 98 53.1
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 3.5e-20 102.1 102 48.0
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 3.9e-19 98.6 85 51.8
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.6e-17 93.2 96 43.8
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 5.8e-15 84.7 58 72.4
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 7.1e-13 77.8 76 55.3
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.2e-12 77.0 75 53.3
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 4.0e-08 62.0 54 59.3


User provided reference genes

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