Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 0.0e+00 1205.7 621 100.0
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 7.9e-301 1036.6 619 86.6
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.9e-287 991.5 620 84.0
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 7.8e-264 913.7 631 75.9
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.1e-262 909.8 627 77.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 3.6e-261 904.8 622 75.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 1.4e-260 902.9 626 75.2
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 5.4e-257 891.0 627 73.0
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 5.0e-255 884.4 632 71.5
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.4e-249 866.3 634 73.3
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 7.8e-248 860.5 630 73.2
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 2.8e-205 719.2 617 65.6
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 5.3e-204 714.9 613 62.3
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 3.4e-203 712.2 638 61.4
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.2e-202 709.5 628 61.6
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 2.9e-202 709.1 610 63.4
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 4.9e-202 708.4 589 63.7
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 1.1e-201 707.2 547 63.4
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 1.1e-201 707.2 611 65.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.9e-201 706.4 614 61.6
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 3.2e-201 705.7 611 61.2
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.1e-201 704.5 608 61.0
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 7.1e-201 704.5 609 61.7
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.2e-200 703.7 592 62.7
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.7e-200 702.6 611 60.7
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.3e-199 700.3 611 60.6
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.3e-199 700.3 618 60.5
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 2.3e-199 699.5 612 64.1
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 5.7e-198 694.9 614 61.7
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 9.7e-198 694.1 611 61.2
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.6e-197 693.3 623 59.1
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 2.2e-197 693.0 604 63.9
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 2.2e-197 693.0 619 62.0
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 2.2e-197 693.0 605 60.3
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.4e-196 690.3 508 72.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.6e-195 686.0 608 61.2
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 4.5e-195 685.3 567 66.1
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.7e-194 683.3 622 61.4
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.2e-194 682.9 615 60.0
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 6.5e-194 681.4 548 67.3
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 6.5e-194 681.4 592 63.3
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 8.5e-194 681.0 616 59.9
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 8.5e-194 681.0 560 66.4
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.4e-193 680.2 624 59.1
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 5.5e-193 678.3 609 60.4
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 4.6e-192 675.2 592 63.5
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.8e-191 673.3 551 67.2
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 2.3e-191 672.9 577 64.5
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 3.0e-191 672.5 624 57.9
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 5.1e-191 671.8 607 58.8
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 7.4e-190 667.9 549 65.2
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 9.7e-190 667.5 612 60.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.4e-188 663.7 614 59.8
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.4e-188 662.9 607 59.5
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.4e-188 662.9 613 58.6
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.4e-188 662.9 615 58.5
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 9.1e-188 661.0 616 58.1
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 9.1e-188 661.0 553 62.2
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 2.0e-187 659.8 567 62.6
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 2.0e-187 659.8 523 67.5
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 2.6e-187 659.4 609 57.5
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 1.0e-186 657.5 616 57.6
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 1.0e-186 657.5 616 57.6
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 2.2e-186 656.4 614 59.9
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.9e-186 656.0 548 65.5
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.2e-185 652.5 558 62.9
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 3.2e-185 652.5 614 58.8
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 3.2e-185 652.5 611 59.9
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 5.5e-185 651.7 617 59.3
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 7.2e-185 651.4 609 59.6
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 9.4e-185 651.0 550 63.6
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.2e-184 650.6 611 60.2
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.6e-184 650.2 564 62.1
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.1e-184 649.8 550 62.0
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 6.1e-184 648.3 584 59.1
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.4e-183 647.1 610 59.5
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 2.6e-182 642.9 613 57.9
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 1.8e-180 636.7 621 56.2
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 4.1e-180 635.6 560 58.4
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 1.5e-179 633.6 623 54.6
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 3.5e-179 632.5 616 54.9
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.7e-178 630.2 551 59.7
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.2e-178 629.8 621 59.3
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.6e-176 623.6 616 58.0
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.4e-175 620.5 608 57.4
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 6.7e-175 618.2 552 59.8
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 3.3e-174 615.9 549 61.0
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.7e-170 603.6 559 57.4
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.3e-165 587.4 606 55.4
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 3.1e-164 582.8 441 67.1
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 7.0e-164 581.6 489 62.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.2e-161 572.8 559 54.6
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 1.8e-159 567.0 345 89.9
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.7e-157 560.5 549 54.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 4.8e-157 558.9 579 52.3
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.3e-146 524.2 551 55.4
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.2e-142 511.1 342 69.0
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 4.6e-139 499.2 576 49.0
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 7.8e-139 498.4 543 50.1
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 3.7e-133 479.6 550 49.6
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 6.6e-122 442.2 429 60.1
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 7.1e-108 395.6 352 61.1
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 5.1e-74 283.1 549 33.9
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.2e-46 192.2 272 37.5
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 5.0e-45 186.8 476 35.9
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 8.0e-43 179.5 492 32.7
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.4e-39 168.7 562 32.0
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 5.4e-39 166.8 240 34.6
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.5e-36 157.9 99 72.7
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 1.0e-29 136.0 73 84.9
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 3.9e-29 134.0 88 70.5
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 3.3e-28 131.0 85 74.1
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.3e-26 124.8 83 71.1
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 8.3e-24 116.3 69 75.4
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 4.0e-18 97.4 58 69.0
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.2e-18 97.1 100 60.0
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 1.2e-17 95.9 233 28.3
FvH4_4g05840 Fragaria vesca HOM05D005043 ORTHO05D006182 1.6e-06 58.9 36 66.7


User provided reference genes

Program Settings