Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G058602 Glycine max HOM05D007537 ORTHO05D009602 3.5e-95 351.7 184 100.0
Glyma.02G257900 Glycine max HOM05D007537 ORTHO05D009602 4.3e-69 265.0 183 82.0
Phvul.008G223100 Phaseolus vulgaris HOM05D007537 ORTHO05D009602 1.8e-51 206.5 190 63.7
VMungo0647G0018 Vigna mungo HOM05D007537 ORTHO05D009602 4.0e-51 205.3 190 63.7
arahy.Tifrunner.gnm1.ann1.QLS93X Arachis hypogaea HOM05D007537 ORTHO05D009602 2.2e-49 199.5 205 59.5
arahy.Tifrunner.gnm1.ann1.EU49LP Arachis hypogaea HOM05D007537 ORTHO05D009602 7.9e-47 191.0 209 56.9
Haze_17238 Corylus avellana HOM05D007537 ORTHO05D009602 5.6e-45 184.9 187 57.8
Prupe.2G251400 Prunus persica HOM05D007537 ORTHO05D009602 1.3e-44 183.7 198 57.1
Psat2g031640 Pisum sativum HOM05D007537 ORTHO05D009602 4.8e-44 181.8 181 60.8
Lalb_Chr04g0250531 Lupinus albus HOM05D007537 ORTHO05D009602 8.1e-44 181.0 186 60.2
Cfa001307 Carpinus fangiana HOM05D007537 ORTHO05D009602 1.1e-43 180.6 188 57.4
Duzib114G0965 Durio zibethinus HOM05D007537 ORTHO05D009602 1.4e-43 180.3 196 55.6
Ca_05971_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 7.6e-42 174.5 195 55.4
Ca_05972_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 7.6e-42 174.5 195 55.4
Thecc.10G014900 Theobroma cacao HOM05D007537 ORTHO05D009602 2.5e-40 169.5 195 53.8
GSVIVG01032801001 Vitis vinifera HOM05D007537 ORTHO05D009602 7.1e-40 167.9 192 52.1
CiPaw.01G299800 Carya illinoinensis HOM05D007537 ORTHO05D009602 9.3e-40 167.5 196 53.1
LjContig00357g0012610 Lotus japonicus HOM05D007537 ORTHO05D009602 2.1e-39 166.4 161 61.5
Medtr5g082850 Medicago truncatula HOM05D007537 ORTHO05D009602 4.6e-39 165.2 163 61.3
Actinidia13942 Actinidia chinensis HOM05D007537 ORTHO05D009602 1.3e-38 163.7 193 53.9
Manes.07G130900 Manihot esculenta HOM05D007537 ORTHO05D009602 2.3e-38 162.9 194 52.1
MELO3C026792.2 Cucumis melo HOM05D007537 ORTHO05D009602 3.0e-38 162.5 192 53.1
RcHm_v2.0_Chr1g0370441 Rosa chinensis HOM05D007537 ORTHO05D009602 3.9e-38 162.2 182 53.3
COL.COLO4_25746 Corchorus olitorius HOM05D007537 ORTHO05D009602 6.7e-38 161.4 196 53.1
Potri.008G069800 Populus trichocarpa HOM05D007537 ORTHO05D009602 8.7e-38 161.0 177 54.2
CSS0034530 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 1.5e-37 160.2 199 49.7
FAN10G0956 Fragaria x ananassa HOM05D007537 ORTHO05D009602 5.7e-37 158.3 185 50.8
Gohir.A13G014800 Gossypium hirsutum HOM05D007537 ORTHO05D009602 5.7e-37 158.3 191 53.4
CsaV3_5G010250 Cucumis sativus L. HOM05D007537 ORTHO05D009602 7.4e-37 157.9 192 52.1
FAN01G2979 Fragaria x ananassa HOM05D007537 ORTHO05D009602 9.6e-37 157.5 182 51.6
Nn2g10869 Nelumbo nucifera HOM05D007537 ORTHO05D009602 1.3e-36 157.1 195 51.3
Rhsim09G0177700 Rhododendron simsii HOM05D007537 ORTHO05D009602 2.1e-36 156.4 181 53.0
vmacro10037 Vaccinium macrocarpon HOM05D007537 ORTHO05D009602 2.8e-36 156.0 181 51.4
Sabra08G0051400 Salix brachista HOM05D007537 ORTHO05D009602 3.7e-36 155.6 177 53.1
FAN03G1922 Fragaria x ananassa HOM05D007537 ORTHO05D009602 4.8e-36 155.2 178 51.1
FvH4_7g24610 Fragaria vesca HOM05D007537 ORTHO05D009602 8.2e-36 154.5 191 49.2
Cc02_g06360 Coffea canephora HOM05D007537 ORTHO05D009602 1.1e-35 154.1 202 50.5
CSS0047961 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 9.0e-35 151.0 196 48.5
TAR633G2636 Trochodendron aralioides HOM05D007537 ORTHO05D009602 9.0e-35 151.0 192 49.5
FAN06G1236 Fragaria x ananassa HOM05D007537 ORTHO05D009602 1.5e-34 150.2 183 49.2
Sp3g09450 Schrenkiella parvula HOM05D007537 ORTHO05D009602 1.5e-34 150.2 197 49.2
CSS0001440 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 3.4e-34 149.1 197 47.7
ClCG07G004310 Citrullus lanatus HOM05D007537 ORTHO05D009602 4.5e-34 148.7 192 50.5
BcaC09g48157 Brassica carinata HOM05D007537 ORTHO05D009602 2.9e-33 146.0 185 49.7
Thhalv10020993m.g Eutrema salsugineum HOM05D007537 ORTHO05D009602 6.5e-33 144.8 196 49.5
BolC1t05333H Brassica oleracea HOM05D007537 ORTHO05D009602 8.4e-33 144.4 185 49.7
CARHR085730 Cardamine hirsuta HOM05D007537 ORTHO05D009602 3.2e-32 142.5 199 48.2
Ciclev10031789m.g Citrus clementina HOM05D007537 ORTHO05D009602 3.2e-32 142.5 161 55.3
PGR044G1397 Punica granatum HOM05D007537 ORTHO05D009602 1.2e-31 140.6 199 47.2
Aa31LG3G4310 Aethionema arabicum HOM05D007537 ORTHO05D009602 1.6e-31 140.2 197 48.7
Gohir.D13G016000 Gossypium hirsutum HOM05D007537 ORTHO05D009602 1.6e-31 140.2 189 47.6
Sed0013636 Sechium edule HOM05D007537 ORTHO05D009602 6.1e-31 138.3 190 47.9
BcaB04g21148 Brassica carinata HOM05D007537 ORTHO05D009602 1.3e-30 137.1 196 46.4
BcaB04g21146 Brassica carinata HOM05D007537 ORTHO05D009602 2.3e-30 136.3 196 46.4
Nitab4.5_0008231g0020 Nicotiana tabacum HOM05D007537 ORTHO05D009602 3.0e-30 136.0 190 44.7
TPR.G38413 Trifolium pratense HOM05D007537 ORTHO05D009602 3.9e-30 135.6 127 59.8
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 1.1e-29 134.0 201 47.8
AT3G11150 Arabidopsis thaliana HOM05D007537 ORTHO05D009602 1.9e-29 133.3 178 47.8
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 2.5e-29 132.9 198 44.9
AL3G22670 Arabidopsis lyrata HOM05D007537 ORTHO05D009602 4.3e-29 132.1 185 49.2
Hund13875 Selenicereus undatus HOM05D007537 ORTHO05D009602 1.6e-28 130.2 191 44.0
Nitab4.5_0000797g0160 Nicotiana tabacum HOM05D007537 ORTHO05D009602 2.8e-28 129.4 192 44.3
Ah.10g036610 Amaranthus hybridus HOM05D007537 ORTHO05D009602 6.3e-28 128.3 199 45.2
DCAR_011821 Daucus carota HOM05D007537 ORTHO05D009602 1.5e-26 123.6 170 45.9
Carub.0003s1045 Capsella rubella HOM05D007537 ORTHO05D009602 2.0e-26 123.2 210 43.8
Sopen06g017350 Solanum pennellii HOM05D007537 ORTHO05D009602 1.0e-25 120.9 201 41.8
Solyc06g051360.3 Solanum lycopersicum HOM05D007537 ORTHO05D009602 1.3e-25 120.6 201 41.8
Peaxi162Scf00284g01051 Petunia axillaris HOM05D007537 ORTHO05D009602 2.2e-25 119.8 182 45.1
THA.LOC104823184 Tarenaya hassleriana HOM05D007537 ORTHO05D009602 3.8e-25 119.0 171 47.4
Gorai.013G017500 Gossypium raimondii HOM05D007537 ORTHO05D009602 1.4e-24 117.1 188 41.0
AUR62012265 Chenopodium quinoa HOM05D007537 ORTHO05D009602 1.2e-23 114.0 167 46.1
AUR62022900 Chenopodium quinoa HOM05D007537 ORTHO05D009602 1.4e-22 110.5 166 44.6
ECA233G1171 Erigeron canadensis HOM05D007537 ORTHO05D009602 5.1e-22 108.6 190 40.5
BraA01t04198Z Brassica rapa HOM05D007537 ORTHO05D009602 1.1e-21 107.5 135 48.9
MSTRG.27338 Avicennia marina HOM05D007537 ORTHO05D009602 1.5e-21 107.1 199 41.7
Oeu004692.1 Olea europaea HOM05D007537 ORTHO05D009602 7.4e-21 104.8 212 40.1
HanXRQChr08g0221761 Helianthus annuus HOM05D007537 ORTHO05D009602 2.2e-20 103.2 128 47.7
PGSC0003DMG400024236 Solanum tuberosum HOM05D007537 ORTHO05D009602 2.2e-20 103.2 204 39.2
Lsat_1_v5_gn_8_12620 Lactuca sativa HOM05D007537 ORTHO05D009602 1.1e-19 100.9 124 46.0
SGA_v2.0_scaffold44G16701 Striga asiatica HOM05D007537 ORTHO05D009602 7.7e-18 94.7 206 36.9
Migut.F00693 Erythranthe guttata HOM05D007537 ORTHO05D009602 1.9e-16 90.1 124 46.0
EL10Ac2g04847 Beta vulgaris HOM05D007537 ORTHO05D009602 1.2e-15 87.4 166 39.8
Eucgr.J00197 Eucalyptus grandis HOM05D007537 ORTHO05D009602 2.7e-15 86.3 98 48.0
MD01G1154300 Malus domestica HOM05D007537 ORTHO05D009602 1.5e-13 80.5 98 55.1
Atru.chr12.52 Acer truncatum HOM05D007537 ORTHO05D009602 1.3e-12 77.4 81 51.9
Sc10g0002440 Simmondsia chinensis HOM05D007537 ORTHO05D009602 1.3e-09 67.4 176 34.7


User provided reference genes

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