Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G036500 Glycine max HOM05D012946 ORTHO05D010116 9.8e-43 176.4 90 100.0
Glyma.02G278000 Glycine max HOM05D012946 ORTHO05D010116 6.2e-37 157.1 91 90.1
Phvul.008G203000 Phaseolus vulgaris HOM05D012946 ORTHO05D010116 2.4e-25 118.6 93 76.3
Phvul.006G016000 Phaseolus vulgaris HOM05D012946 ORTHO05D010116 5.4e-17 90.9 92 56.5
Medtr5g089080 Medicago truncatula HOM05D012946 ORTHO05D010116 9.2e-17 90.1 85 65.9
Lj6g0008281 Lotus japonicus HOM05D012946 ORTHO05D010116 2.1e-16 89.0 86 62.8
Lalb_Chr10g0106131 Lupinus albus HOM05D012946 ORTHO05D010116 2.3e-15 85.5 94 55.3
Glyma.20G042900 Glycine max HOM05D012946 ORTHO05D010116 9.6e-14 80.1 88 54.5
arahy.Tifrunner.gnm1.ann1.K04G9P Arachis hypogaea HOM05D012946 ORTHO05D010116 5.3e-12 74.3 88 54.5
arahy.Tifrunner.gnm1.ann1.Y676PW Arachis hypogaea HOM05D012946 ORTHO05D010116 1.2e-11 73.2 88 53.4
TPR.G16421 Trifolium pratense HOM05D012946 ORTHO05D010116 7.6e-11 70.5 82 54.9
QL01p016614 Quercus lobata HOM05D008349 ORTHO05D010116 8.4e-10 67.0 75 54.7
Glyma.07G235300 Glycine max HOM05D012946 ORTHO05D010116 1.9e-09 65.9 90 48.9
Eucgr.B03753 Eucalyptus grandis HOM05D008349 ORTHO05D010116 2.4e-09 65.5 78 51.3
CiPaw.13G148400 Carya illinoinensis HOM05D008349 ORTHO05D010116 1.6e-08 62.8 99 44.4
Dinv22212 Davidia involucrata HOM05D008349 ORTHO05D010116 1.6e-08 62.8 76 50.0
VMungo0540G1528 Vigna mungo HOM05D012946 ORTHO05D010116 2.7e-08 62.0 71 52.1
CiPaw.14G110800 Carya illinoinensis HOM05D008349 ORTHO05D010116 7.8e-08 60.5 77 48.1
Hma1.2p1_0460F.1_g157620 Hydrangea macrophylla HOM05D008349 ORTHO05D010116 1.3e-07 59.7 88 43.2
Nn7g36871 Nelumbo nucifera HOM05D008349 ORTHO05D010116 1.7e-07 59.3 77 48.1
Cfa009902 Carpinus fangiana HOM05D008349 ORTHO05D010116 3.3e-06 55.1 76 46.1
Potri.001G274200 Populus trichocarpa HOM05D008349 ORTHO05D010116 4.3e-06 54.7 79 44.3
Potri.009G068800 Populus trichocarpa HOM05D008349 ORTHO05D010116 5.6e-06 54.3 79 44.3
Haze_23263 Corylus avellana HOM05D008349 ORTHO05D010116 7.3e-06 53.9 76 42.1
Sabra09G0051800 Salix brachista HOM05D008349 ORTHO05D010116 9.6e-06 53.5 77 44.2


User provided reference genes

Program Settings