Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G034400 Glycine max HOM05D007455 ORTHO05D009431 2.6e-76 290.8 151 100.0
Phvul.008G200500 Phaseolus vulgaris HOM05D007455 ORTHO05D009431 2.5e-55 221.1 153 79.7
VMungo0647G0695 Vigna mungo HOM05D007455 ORTHO05D009431 1.6e-49 201.8 153 74.5
LjContig00049g0012641 Lotus japonicus HOM05D007455 ORTHO05D009431 2.3e-37 161.4 155 60.6
TPR.G19357 Trifolium pratense HOM05D007455 ORTHO05D009431 2.0e-36 158.3 161 57.8
Ca_06217_v3 Cicer arietinum L. HOM05D007455 ORTHO05D009431 3.2e-34 151.0 146 58.9
Medtr5g090210 Medicago truncatula HOM05D007455 ORTHO05D009431 5.4e-34 150.2 114 69.3
arahy.Tifrunner.gnm1.ann1.DBR4AW Arachis hypogaea HOM05D007455 ORTHO05D009431 2.1e-33 148.3 148 58.1
arahy.Tifrunner.gnm1.ann1.U7VIMI Arachis hypogaea HOM05D007455 ORTHO05D009431 6.0e-33 146.7 148 58.1
Psat2g019880 Pisum sativum HOM05D007455 ORTHO05D009431 7.8e-33 146.4 112 71.4
Lalb_Chr10g0106311 Lupinus albus HOM05D007455 ORTHO05D009431 1.1e-31 142.5 153 53.6
TWI79G0736 Tripterygium wilfordii HOM05D007455 ORTHO05D009431 1.5e-31 142.1 128 58.6
Cfa009846 Carpinus fangiana HOM05D007455 ORTHO05D009431 2.8e-30 137.9 112 67.0
Prupe.2G102900 Prunus persica HOM05D007455 ORTHO05D009431 4.7e-30 137.1 112 63.4
Cpa.g.sc84.2 Carica papaya HOM05D007455 ORTHO05D009431 1.1e-29 136.0 112 62.5
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 1.1e-29 136.0 112 65.2
Atru.chr3.2773 Acer truncatum HOM05D007455 ORTHO05D009431 1.4e-29 135.6 112 61.6
CiPaw.13G151600 Carya illinoinensis HOM05D007455 ORTHO05D009431 1.4e-29 135.6 112 66.1
Haze_23220 Corylus avellana HOM05D007455 ORTHO05D009431 1.4e-29 135.6 112 66.1
Potri.001G276500 Populus trichocarpa HOM05D007455 ORTHO05D009431 2.4e-29 134.8 120 57.5
PGR102G2888 Punica granatum HOM05D007455 ORTHO05D009431 2.4e-29 134.8 120 60.0
Gohir.D07G124600 Gossypium hirsutum HOM05D007455 ORTHO05D009431 3.1e-29 134.4 112 61.6
Sabra16G0170600 Salix brachista HOM05D007455 ORTHO05D009431 3.1e-29 134.4 120 55.0
ClCG03G012670 Citrullus lanatus HOM05D007455 ORTHO05D009431 6.8e-29 133.3 112 62.5
Thecc.09G249700 Theobroma cacao HOM05D007455 ORTHO05D009431 8.9e-29 132.9 112 59.8
Dinv36177 Davidia involucrata HOM05D007455 ORTHO05D009431 1.2e-28 132.5 122 55.7
COL.COLO4_05199 Corchorus olitorius HOM05D007455 ORTHO05D009431 2.6e-28 131.3 116 59.5
FAN11G1556 Fragaria x ananassa HOM05D007455 ORTHO05D009431 2.6e-28 131.3 112 60.7
Gorai.001G134400 Gossypium raimondii HOM05D007455 ORTHO05D009431 3.4e-28 131.0 112 60.7
MD07G1079700 Malus domestica HOM05D007455 ORTHO05D009431 4.4e-28 130.6 125 54.4
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 5.8e-28 130.2 113 59.3
Lj1C286T3 Lonicera japonica HOM05D007455 ORTHO05D009431 7.6e-28 129.8 113 59.3
MELO3C015131.2 Cucumis melo HOM05D007455 ORTHO05D009431 9.9e-28 129.4 112 60.7
Manes.01G179100 Manihot esculenta HOM05D007455 ORTHO05D009431 9.9e-28 129.4 112 58.9
RcHm_v2.0_Chr5g0050671 Rosa chinensis HOM05D007455 ORTHO05D009431 9.9e-28 129.4 109 61.5
FvH4_3g27950 Fragaria vesca HOM05D007455 ORTHO05D009431 1.3e-27 129.0 110 60.9
FAN16G2585 Fragaria x ananassa HOM05D007455 ORTHO05D009431 1.7e-27 128.6 110 60.9
C03p00670 Brassica napus HOM05D007455 ORTHO05D009431 2.2e-27 128.3 141 51.8
BolC3t12630H Brassica oleracea HOM05D007455 ORTHO05D009431 2.2e-27 128.3 141 51.8
AT5G01110 Arabidopsis thaliana HOM05D007455 ORTHO05D009431 2.9e-27 127.9 112 59.8
CSS0022782 Camellia sinensis var. sinensis HOM05D007455 ORTHO05D009431 2.9e-27 127.9 120 55.0
BcaB01g06086 Brassica carinata HOM05D007455 ORTHO05D009431 3.8e-27 127.5 141 51.1
Ciclev10017597m.g Citrus clementina HOM05D007455 ORTHO05D009431 3.8e-27 127.5 111 60.4
HanXRQChr06g0182581 Helianthus annuus HOM05D007455 ORTHO05D009431 3.8e-27 127.5 113 59.3
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 4.9e-27 127.1 113 59.3
Eucgr.C02447 Eucalyptus grandis HOM05D007455 ORTHO05D009431 4.9e-27 127.1 112 61.6
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 1.4e-26 125.6 112 58.0
CsaV3_1G043280 Cucumis sativus L. HOM05D007455 ORTHO05D009431 1.4e-26 125.6 112 58.9
Lsat_1_v5_gn_9_106260 Lactuca sativa HOM05D007455 ORTHO05D009431 1.4e-26 125.6 112 59.8
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 1.9e-26 125.2 120 56.7
BraA03t09431Z Brassica rapa HOM05D007455 ORTHO05D009431 3.2e-26 124.4 112 58.0
CARHR211430 Cardamine hirsuta HOM05D007455 ORTHO05D009431 3.2e-26 124.4 111 57.7
Thhalv10012778m.g Eutrema salsugineum HOM05D007455 ORTHO05D009431 3.2e-26 124.4 112 57.1
PSO384G2302 Papaver somniferum HOM05D007455 ORTHO05D009431 3.2e-26 124.4 112 58.0
Carub.0006s0076 Capsella rubella HOM05D007455 ORTHO05D009431 4.2e-26 124.0 112 56.2
Sp6g40500 Schrenkiella parvula HOM05D007455 ORTHO05D009431 4.2e-26 124.0 112 56.2
ECA232G4213 Erigeron canadensis HOM05D007455 ORTHO05D009431 9.3e-26 122.9 114 57.0
Manes.01G179300 Manihot esculenta HOM05D007455 ORTHO05D009431 9.3e-26 122.9 112 56.2
Actinidia16375 Actinidia chinensis HOM05D007455 ORTHO05D009431 1.2e-25 122.5 120 55.8
AL6G11100 Arabidopsis lyrata HOM05D007455 ORTHO05D009431 1.6e-25 122.1 108 56.5
TAR636G1848 Trochodendron aralioides HOM05D007455 ORTHO05D009431 1.6e-25 122.1 110 58.2
MD02G1234700 Malus domestica HOM05D007455 ORTHO05D009431 2.1e-25 121.7 112 56.2
Sc16g0011110 Simmondsia chinensis HOM05D007455 ORTHO05D009431 2.7e-25 121.3 163 46.6
Sed0025332 Sechium edule HOM05D007455 ORTHO05D009431 4.6e-25 120.6 112 56.2
MBI01_g10232_MAGBIO Magnolia biondii HOM05D007455 ORTHO05D009431 6.0e-25 120.2 102 54.9
AUR62006535 Chenopodium quinoa HOM05D007455 ORTHO05D009431 7.8e-25 119.8 112 55.4
Medtr5g089850 Medicago truncatula HOM05D007455 ORTHO05D009431 7.8e-25 119.8 97 67.0
Nitab4.5_0000276g0130 Nicotiana tabacum HOM05D007455 ORTHO05D009431 3.0e-24 117.9 163 44.2
PSO339G2893 Papaver somniferum HOM05D007455 ORTHO05D009431 3.9e-24 117.5 122 52.5
CANSAT25G1433 Cannabis sativa HOM05D007455 ORTHO05D009431 5.1e-24 117.1 101 60.4
Cc01_g05470 Coffea canephora HOM05D007455 ORTHO05D009431 6.6e-24 116.7 110 56.4
DCAR_002103 Daucus carota HOM05D007455 ORTHO05D009431 1.1e-23 115.9 112 53.6
Gohir.A07G120400 Gossypium hirsutum HOM05D007455 ORTHO05D009431 1.1e-23 115.9 93 64.5
CAN.G113.7 Capsicum annuum HOM05D007455 ORTHO05D009431 1.9e-23 115.2 112 52.7
PGSC0003DMG401009622 Solanum tuberosum HOM05D007455 ORTHO05D009431 1.9e-23 115.2 112 52.7
Sopen04g025650 Solanum pennellii HOM05D007455 ORTHO05D009431 2.5e-23 114.8 112 53.6
PGSC0003DMG400001336 Solanum tuberosum HOM05D007455 ORTHO05D009431 2.5e-23 114.8 112 52.7
AUR62000183 Chenopodium quinoa HOM05D007455 ORTHO05D009431 5.6e-23 113.6 102 57.8
HPP92_001923 Vanilla planifolia HOM05D007455 ORTHO05D009431 7.3e-23 113.2 122 49.2
GSVIVG01037263001 Vitis vinifera HOM05D007455 ORTHO05D009431 9.6e-23 112.8 93 61.3
Ah.06g194500 Amaranthus hybridus HOM05D007455 ORTHO05D009431 3.6e-22 110.9 102 56.9
Peaxi162Scf01229g00021 Petunia axillaris HOM05D007455 ORTHO05D009431 3.6e-22 110.9 107 53.3
ATR0829G035 Amborella trichopoda HOM05D007455 ORTHO05D009431 8.1e-22 109.8 109 50.5
EL10Ac4g10136 Beta vulgaris HOM05D007455 ORTHO05D009431 1.4e-21 109.0 162 41.4
EL10Ac4g10151 Beta vulgaris HOM05D007455 ORTHO05D009431 1.8e-21 108.6 162 41.4
MSTRG.12443 Avicennia marina HOM05D007455 ORTHO05D009431 2.4e-21 108.2 111 51.4
Oeu039576.1 Olea europaea HOM05D007455 ORTHO05D009431 4.0e-21 107.5 117 50.4
Migut.N02370 Erythranthe guttata HOM05D007455 ORTHO05D009431 1.5e-20 105.5 113 49.6
FAN25G1872 Fragaria x ananassa HOM05D007455 ORTHO05D009431 2.6e-20 104.8 93 59.1
CSS0035807 Camellia sinensis var. sinensis HOM05D007455 ORTHO05D009431 7.6e-20 103.2 120 48.3
SGA_v2.0_scaffold496G52473 Striga asiatica HOM05D007455 ORTHO05D009431 7.6e-20 103.2 117 50.4
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 1.7e-19 102.1 123 43.9
Sabra16G0170400 Salix brachista HOM05D007455 ORTHO05D009431 4.9e-19 100.5 98 57.1
Nn7g36673 Nelumbo nucifera HOM05D007455 ORTHO05D009431 1.1e-18 99.4 73 65.8
SalBow4G0419 Salvia bowleyana HOM05D007455 ORTHO05D009431 2.4e-18 98.2 118 45.8
Os03g0165100 Oryza sativa ssp. japonica HOM05D007455 ORTHO05D009431 2.8e-14 84.7 102 51.0
BolC3t13332H Brassica oleracea HOM05D007455 ORTHO05D009431 4.6e-09 67.4 74 52.7
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 1.0e-08 66.2 112 35.7
ATR0751G228 Amborella trichopoda HOM05D007390 ORTHO05D009114 8.7e-08 63.2 114 35.1
Aqoxy4G00642 Aquilegia oxysepala HOM05D007390 ORTHO05D009114 1.5e-07 62.4 106 35.8
Duzib213G0999 Durio zibethinus HOM05D007390 ORTHO05D009114 1.5e-07 62.4 110 34.5
CiPaw.01G118600 Carya illinoinensis HOM05D007291 ORTHO05D009038 2.5e-07 61.6 111 36.9
BcaB05g24168 Brassica carinata HOM05D007291 ORTHO05D009038 3.3e-07 61.2 106 34.9
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 3.3e-07 61.2 112 33.9
QL02p057926 Quercus lobata HOM05D007291 ORTHO05D009038 4.3e-07 60.8 116 35.3
QL93p0100_0337 Quercus lobata HOM05D007291 ORTHO05D009038 4.3e-07 60.8 116 35.3
SGA_v2.0_scaffold13G06360 Striga asiatica HOM05D007390 ORTHO05D009114 4.3e-07 60.8 113 32.7
BcaB08g35953 Brassica carinata HOM05D007390 ORTHO05D009114 5.6e-07 60.5 112 33.0
CARHR058230 Cardamine hirsuta HOM05D007291 ORTHO05D009038 5.6e-07 60.5 123 35.8
Medtr2g036080 Medicago truncatula HOM05D007390 ORTHO05D009114 5.6e-07 60.5 131 33.6
Nn5g29749 Nelumbo nucifera HOM05D007390 ORTHO05D009114 5.6e-07 60.5 110 33.6
Thhalv10018418m.g Eutrema salsugineum HOM05D007291 ORTHO05D009038 1.3e-06 59.3 116 37.1
Haze_11634 Corylus avellana HOM05D007291 ORTHO05D009038 1.6e-06 58.9 116 36.2
Dinv28212 Davidia involucrata HOM05D007291 ORTHO05D009038 1.6e-06 58.9 130 33.1
QL08p003914 Quercus lobata HOM05D007390 ORTHO05D009114 1.6e-06 58.9 110 30.9
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 1.6e-06 58.9 112 33.0
A02p13610 Brassica napus HOM05D007291 ORTHO05D009038 2.1e-06 58.5 110 34.5
BraA02t06420Z Brassica rapa HOM05D007291 ORTHO05D009038 2.1e-06 58.5 110 34.5
Hma1.2p1_0013F.1_g008830 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 2.1e-06 58.5 109 32.1
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 2.8e-06 58.2 108 31.5
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 4.8e-06 57.4 155 31.6
Manes.15G058900 Manihot esculenta HOM05D007390 ORTHO05D009114 6.2e-06 57.0 111 33.3
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 8.1e-06 56.6 150 25.3


User provided reference genes

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