Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 3.7e-247 857.8 457 100.0
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.2e-168 597.0 458 72.1
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.5e-158 562.8 458 66.4
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 1.9e-142 510.0 463 63.5
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 9.9e-99 364.8 491 48.7
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 2.7e-96 356.7 348 58.0
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 6.0e-96 355.5 352 60.5
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 4.3e-94 349.4 448 50.7
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 4.9e-90 335.9 493 45.2
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.3e-87 327.8 310 59.7
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.5e-86 324.3 355 56.6
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 8.1e-85 318.5 380 54.2
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.1e-80 303.9 380 52.4
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.3e-74 284.6 427 45.7
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 2.5e-70 270.4 416 45.2
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 6.9e-68 262.3 482 42.7
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 2.5e-65 253.8 404 44.3
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 6.3e-61 239.2 350 44.3
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 8.2e-61 238.8 299 46.8
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 1.8e-60 237.7 482 38.6
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.9e-58 230.3 381 42.5
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 2.5e-57 227.3 513 40.0
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.0e-55 221.9 449 36.5
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 7.4e-54 215.7 292 44.9
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 8.2e-53 212.2 460 35.7
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 3.2e-49 200.3 303 42.6
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 5.5e-49 199.5 292 41.4
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 9.4e-49 198.7 412 36.4
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.5e-46 191.4 380 38.2
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 5.7e-46 189.5 419 35.6
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 9.7e-46 188.7 379 36.4
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 1.3e-45 188.3 305 40.7
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 2.2e-45 187.6 356 37.4
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 4.8e-45 186.4 429 34.7
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 8.2e-45 185.7 386 39.6
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.1e-44 185.3 463 33.0
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 7.0e-44 182.6 373 36.7
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 1.5e-43 181.4 289 39.8
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.5e-43 181.4 462 33.1
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 5.9e-43 179.5 390 35.6
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.0e-42 178.7 357 35.9
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.3e-42 178.3 374 36.1
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.7e-42 177.9 374 36.1
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 2.9e-42 177.2 431 33.6
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 3.8e-42 176.8 274 43.1
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 5.0e-42 176.4 389 35.5
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 2.5e-41 174.1 310 36.8
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 4.2e-41 173.3 368 36.4
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.1e-40 171.0 412 33.3
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 2.1e-40 171.0 394 35.8
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 4.7e-40 169.9 439 31.7
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 6.1e-40 169.5 386 36.8
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.0e-39 167.2 294 36.4
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 3.0e-39 167.2 403 32.8
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 6.7e-39 166.0 303 40.6
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.5e-38 164.9 458 33.0
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.5e-38 164.9 297 39.4
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.5e-38 164.9 329 36.8
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 2.0e-38 164.5 422 31.8
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 4.4e-38 163.3 352 36.4
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 9.7e-38 162.2 382 34.3
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.3e-37 161.8 307 37.8
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.7e-37 161.4 282 37.9
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.7e-37 161.4 427 32.1
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.8e-36 157.9 468 30.6
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.8e-36 157.9 363 35.5
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.8e-36 157.9 380 32.9
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 2.4e-36 157.5 299 35.1
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 5.3e-36 156.4 437 30.4
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.3e-36 156.4 333 36.9
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 5.3e-36 156.4 320 34.1
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 7.0e-36 156.0 468 30.3
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 7.0e-36 156.0 468 30.3
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 7.0e-36 156.0 468 30.3
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 7.0e-36 156.0 285 37.2
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.6e-35 154.1 458 30.1
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 2.6e-35 154.1 383 32.9
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 3.5e-35 153.7 382 33.0
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 5.9e-35 152.9 381 36.0
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 5.9e-35 152.9 370 33.8
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.0e-34 152.1 398 33.4
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.3e-34 151.8 289 36.3
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.3e-34 151.8 298 37.2
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 2.2e-34 151.0 324 32.4
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.1e-33 148.7 309 35.3
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 2.5e-33 147.5 347 34.9
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 3.2e-33 147.1 287 36.6
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 3.2e-33 147.1 333 34.5
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 5.5e-33 146.4 420 32.1
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 1.6e-32 144.8 351 36.8
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 6.1e-32 142.9 460 28.3
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 2.2e-29 134.4 347 32.0
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.4e-28 131.7 247 37.2
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.4e-28 131.7 290 34.8
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.4e-28 131.7 315 33.0
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.0e-27 127.9 273 35.2
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.3e-26 125.2 273 34.8
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.2e-26 124.4 349 30.7
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.8e-26 123.6 391 29.7
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.2e-24 118.6 265 30.6
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.1e-24 117.9 299 32.8
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 6.1e-24 116.3 379 28.2
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 3.0e-23 114.0 237 37.6
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 4.0e-23 113.6 252 35.3
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 1.3e-21 108.6 300 31.0
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.7e-21 107.1 214 34.6
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 4.8e-21 106.7 386 28.8
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 7.0e-20 102.8 366 28.4
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.2e-19 102.1 177 39.5
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 1.3e-18 98.6 94 58.5
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 4.2e-17 93.6 329 29.2
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 7.2e-17 92.8 434 27.0
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.8e-16 90.9 325 30.2
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 1.4e-12 78.6 81 48.1
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.3e-10 71.2 226 29.6


User provided reference genes

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