Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.0e-196 689.9 352 100.0
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 6.1e-189 664.1 352 95.5
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 3.3e-179 631.7 349 92.6
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 2.6e-176 622.1 355 91.5
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 7.0e-161 570.9 357 82.4
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 2.0e-160 569.3 353 83.0
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.3e-159 566.6 353 83.0
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.3e-159 566.6 353 83.0
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.3e-159 566.6 353 83.0
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.3e-159 566.6 353 83.0
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 5.0e-159 564.7 353 82.7
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 5.0e-159 564.7 351 82.3
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.8e-156 556.2 343 83.4
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 2.0e-155 552.7 352 81.2
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.6e-155 552.4 354 81.4
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 4.4e-155 551.6 349 82.8
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 3.1e-132 475.7 352 70.5
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 8.9e-132 474.2 352 69.3
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.4e-131 472.2 352 69.0
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.2e-130 469.5 353 67.7
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.9e-130 469.2 350 68.3
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 2.4e-129 466.1 352 68.5
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 2.1e-128 463.0 351 68.7
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 2.7e-128 462.6 352 66.8
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 7.8e-128 461.1 352 68.5
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.3e-127 460.3 347 69.2
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.0e-127 459.1 355 67.9
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 5.1e-127 458.4 351 68.4
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 4.3e-126 455.3 354 66.4
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.2e-123 447.2 350 65.1
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.7e-122 443.4 339 67.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.2e-122 443.0 353 64.9
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.2e-121 439.1 351 64.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 3.2e-121 439.1 351 65.5
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.0e-119 434.1 369 63.1
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.7e-119 433.3 355 63.9
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.3e-119 433.0 367 62.7
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 5.1e-119 431.8 355 65.4
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 5.6e-118 428.3 358 63.1
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 2.8e-117 426.0 338 65.7
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 1.8e-116 423.3 354 62.1
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 5.2e-116 421.8 356 62.6
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 6.8e-116 421.4 345 63.5
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 6.8e-116 421.4 349 63.6
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 8.9e-116 421.0 304 67.4
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.2e-115 420.6 353 61.2
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 1.2e-115 420.6 352 61.9
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 5.8e-115 418.3 355 61.7
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 6.4e-114 414.8 352 62.5
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 8.4e-114 414.5 352 59.9
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.4e-113 413.7 352 61.1
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 2.1e-112 409.8 346 63.0
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 8.7e-111 404.4 350 58.3
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.5e-110 403.7 349 60.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 9.6e-110 401.0 351 59.5
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.3e-109 400.6 339 59.9
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.1e-108 397.5 339 60.2
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 4.0e-108 395.6 352 59.4
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.5e-107 393.7 352 59.4
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 2.6e-107 392.9 358 58.4
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 7.6e-107 391.3 344 60.5
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.3e-106 390.6 338 58.9
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 4.9e-106 388.7 341 60.1
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 6.4e-106 388.3 307 62.5
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.1e-105 387.5 347 57.9
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.1e-105 387.5 354 57.6
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.9e-105 386.7 354 57.1
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 4.2e-105 385.6 348 57.5
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 5.4e-105 385.2 348 59.2
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 5.4e-105 385.2 346 58.4
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 9.3e-105 384.4 341 59.2
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 6.0e-104 381.7 303 62.7
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 7.9e-104 381.3 356 57.9
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 7.9e-104 381.3 303 63.0
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 7.9e-104 381.3 358 57.8
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.0e-103 380.9 309 61.8
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 1.3e-103 380.6 409 53.3
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.7e-103 380.2 301 60.5
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 3.3e-102 375.9 309 61.5
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 9.6e-102 374.4 303 63.4
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.2e-99 367.5 316 60.1
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 4.5e-99 365.5 309 60.8
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 1.9e-97 360.1 349 57.0
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.7e-95 351.3 372 51.1
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 3.1e-92 342.8 299 60.2
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.6e-91 339.7 307 55.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 3.2e-89 332.8 269 59.9
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 6.0e-88 328.6 265 62.3
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.8e-87 327.0 268 62.3
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 5.1e-87 325.5 336 53.3
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 2.9e-82 309.7 349 47.6
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.1e-80 303.5 409 47.4
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 3.5e-80 302.8 343 48.1
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.1e-78 297.7 343 47.5
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.8e-76 290.4 272 54.0
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 3.1e-76 289.7 304 51.6
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 1.1e-73 281.2 339 46.9
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 3.3e-62 243.0 267 51.3
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.8e-60 237.3 140 85.0
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 5.3e-60 235.7 140 85.0
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-59 234.2 145 82.8
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 5.2e-55 219.2 362 37.6
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 1.1e-54 218.0 257 47.5
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.4e-52 211.1 215 54.4
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 7.2e-49 198.7 134 69.4
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.6e-48 197.6 186 54.3
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 2.8e-45 186.8 182 54.9
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 3.6e-40 169.9 191 55.5
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.8e-37 160.2 121 66.1
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 4.9e-37 159.5 108 79.6
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 1.8e-36 157.5 166 51.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.2e-35 154.8 106 78.3
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 2.0e-27 127.5 249 34.5
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 1.7e-21 107.8 190 32.6
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-19 101.3 62 83.9
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 1.8e-15 87.8 112 42.9
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.5e-09 67.4 69 55.1
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.2e-06 58.5 96 35.4


User provided reference genes

Program Settings