Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.4e-91 339.7 182 100.0
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.4e-50 201.8 184 64.1
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.2e-47 193.7 185 66.5
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 3.0e-46 189.1 190 60.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 6.2e-44 181.4 183 60.7
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 6.8e-43 177.9 196 57.1
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 8.9e-43 177.6 193 61.7
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.2e-41 172.9 189 56.6
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 2.9e-41 172.6 195 56.9
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.9e-40 169.9 193 58.0
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 4.1e-40 168.7 184 58.7
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 2.7e-39 166.0 186 54.8
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 7.8e-39 164.5 186 60.8
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 1.5e-37 160.2 170 61.2
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 5.6e-37 158.3 187 56.7
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.4e-35 153.7 186 54.3
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.2e-34 150.6 186 53.8
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.2e-34 150.6 182 51.1
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 4.4e-34 148.7 197 52.3
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.7e-33 146.7 189 52.4
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.1e-32 144.1 185 52.4
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.4e-32 143.7 188 53.2
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.4e-32 143.7 192 52.1
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 2.4e-32 142.9 184 52.2
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.4e-32 142.9 177 50.8
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.4e-32 142.9 200 47.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 7.1e-32 141.4 179 49.2
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.6e-31 140.2 188 50.0
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 2.1e-31 139.8 188 50.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 4.6e-31 138.7 193 50.8
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.8e-31 137.9 189 46.6
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.3e-30 136.3 184 51.6
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 3.0e-30 136.0 226 45.1
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 3.0e-30 136.0 198 46.5
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 3.0e-30 136.0 192 47.9
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 5.1e-30 135.2 195 48.2
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 5.1e-30 135.2 195 45.6
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 2.5e-29 132.9 190 49.5
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 3.3e-29 132.5 184 46.7
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 3.3e-29 132.5 186 51.6
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.1e-28 129.8 189 47.6
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.1e-28 129.8 189 47.1
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.6e-28 129.0 197 45.2
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.6e-28 129.0 197 45.2
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 3.6e-28 129.0 202 47.0
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 8.1e-28 127.9 176 50.0
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 1.4e-27 127.1 207 43.5
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.8e-27 126.7 198 42.9
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.8e-27 126.7 207 43.5
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.8e-27 126.7 207 43.5
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 3.1e-27 125.9 186 44.6
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 5.2e-27 125.2 202 43.6
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.2e-26 124.0 188 43.6
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.5e-26 123.6 210 46.7
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.5e-26 123.6 192 44.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 2.9e-25 119.4 183 44.3
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.9e-25 119.4 197 43.7
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.9e-25 119.4 175 48.6
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 3.8e-25 119.0 204 43.6
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 4.9e-25 118.6 199 47.7
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.1e-24 117.5 197 47.2
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.4e-24 117.1 185 44.3
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 2.4e-24 116.3 199 44.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 1.2e-23 114.0 187 43.3
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.6e-23 113.6 168 49.4
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.0e-22 110.9 179 43.6
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 5.1e-22 108.6 196 43.4
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 4.3e-21 105.5 185 43.8
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 4.3e-21 105.5 191 39.8
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 9.6e-21 104.4 201 40.8
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 9.6e-21 104.4 210 42.4
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.8e-19 100.1 180 40.6
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 4.0e-19 99.0 172 40.7
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 6.9e-19 98.2 185 41.1
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 6.9e-19 98.2 169 42.0
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.2e-18 97.4 151 47.7
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 1.2e-18 97.4 185 35.1
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 5.8e-18 95.1 193 39.9
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 7.6e-18 94.7 139 48.9
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 7.6e-18 94.7 192 42.2
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-17 93.6 179 44.1
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 4.9e-17 92.0 199 39.7
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.4e-16 90.5 198 42.9
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 2.4e-16 89.7 175 37.1
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 5.4e-16 88.6 193 41.5
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 6.0e-15 85.1 181 39.8
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 8.7e-14 81.3 155 41.3
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 2.1e-12 76.6 220 36.4
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 6.2e-12 75.1 158 39.9
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 7.6e-10 68.2 94 46.8
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 6.4e-09 65.1 124 42.7
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.2e-08 62.8 172 32.6
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 7.1e-08 61.6 205 29.8
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.6e-07 60.5 133 37.6
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 6.0e-07 58.5 140 35.0


User provided reference genes

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