Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 4.8e-94 347.8 177 100.0
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 9.4e-90 333.6 175 97.1
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 4.3e-34 148.7 187 47.6
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 1.1e-32 144.1 187 47.1
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 1.3e-27 127.1 183 41.5
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 1.8e-27 126.7 186 41.4
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 1.1e-26 124.0 183 45.4
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.1e-26 124.0 187 43.3
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 1.9e-26 123.2 178 46.6
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 1.9e-26 123.2 178 46.6
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 1.9e-26 123.2 178 46.6
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 1.9e-26 123.2 178 46.6
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 7.4e-26 121.3 178 46.1
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.1e-25 119.8 178 45.5
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 6.9e-24 114.8 177 40.7
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.6e-23 112.8 181 40.9
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 7.6e-23 111.3 182 40.7
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 2.2e-22 109.8 171 38.6
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 2.2e-22 109.8 178 37.1
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-22 109.4 148 40.5
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 4.9e-22 108.6 180 40.6
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 6.5e-22 108.2 181 39.2
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 1.1e-21 107.5 173 38.7
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 1.1e-21 107.5 178 36.5
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 4.2e-21 105.5 176 35.8
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 3.5e-20 102.4 175 36.6
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 4.6e-20 102.1 183 37.7
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-19 100.5 181 37.6
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-19 100.5 181 37.6
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 3.0e-19 99.4 145 41.4
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.0e-19 99.4 181 37.6
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 3.9e-19 99.0 145 42.8
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 5.1e-19 98.6 180 36.7
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 6.7e-19 98.2 169 38.5
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 6.7e-19 98.2 169 38.5
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 6.7e-19 98.2 145 37.2
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-18 97.4 179 38.5
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 7.4e-18 94.7 174 34.5
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 1.8e-16 90.1 147 34.7
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 2.4e-16 89.7 117 41.9
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 3.1e-16 89.4 131 36.6
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 5.3e-16 88.6 169 33.7
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 6.9e-16 88.2 167 35.9
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 4.5e-15 85.5 174 35.6
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 1.3e-14 84.0 169 33.7
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 8.4e-14 81.3 174 32.2
Medtr3g060470 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-13 79.3 170 34.1
Medtr3g060520 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-13 79.3 170 34.1
Medtr3g060570 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-13 79.3 170 34.1
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 4.2e-13 79.0 172 32.0
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 4.2e-13 79.0 149 34.9
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 5.5e-13 78.6 149 33.6
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-12 76.6 170 30.0
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-12 76.6 145 33.1
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-12 76.3 176 27.8
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 2.7e-12 76.3 176 27.8
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 3.9e-11 72.4 168 29.8
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 3.9e-11 72.4 166 28.9
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 5.1e-11 72.0 150 33.3
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 8.7e-11 71.2 151 29.1
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 1.5e-10 70.5 150 32.7
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 1.9e-10 70.1 125 35.2
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 5.7e-10 68.6 147 33.3
Psat6g191480 Pisum sativum HOM05D004894 ORTHO05D005689 7.4e-10 68.2 104 37.5
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 9.7e-10 67.8 169 31.4
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-09 67.0 170 31.8
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 2.2e-09 66.6 172 29.7
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 4.8e-09 65.5 175 29.1
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 6.3e-09 65.1 146 28.8
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 1.8e-08 63.5 142 31.7
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 1.8e-08 63.5 105 38.1
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 5.3e-08 62.0 105 34.3
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 5.3e-08 62.0 139 29.5
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 7.7e-07 58.2 155 30.3
Atru.chr13.2013 Acer truncatum HOM05D004894 ORTHO05D005689 1.7e-06 57.0 145 33.1
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 1.7e-06 57.0 179 27.4
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-06 56.2 178 27.5
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 3.8e-06 55.8 179 26.8
Glyma.05G160400 Glycine max HOM05D004894 ORTHO05D005689 8.5e-06 54.7 85 42.4


User provided reference genes

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