Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 2.9e-94 348.6 182 100.0
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 9.2e-40 167.5 171 60.8
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 1.7e-38 163.3 129 75.2
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 3.6e-36 155.6 130 65.4
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 6.6e-30 134.8 122 63.9
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 1.6e-28 130.2 123 62.6
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 1.4e-24 117.1 135 55.6
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 7.1e-24 114.8 133 57.1
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 1.6e-23 113.6 96 60.4
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 2.7e-23 112.8 88 68.2
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 6.0e-23 111.7 91 60.4
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 1.0e-22 110.9 87 64.4
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 1.0e-22 110.9 128 51.6
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.0e-22 110.9 120 55.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 1.3e-22 110.5 96 60.4
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 1.3e-22 110.5 139 48.2
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 6.6e-22 108.2 82 65.9
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 8.7e-22 107.8 120 54.2
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 8.7e-22 107.8 96 60.4
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 8.7e-22 107.8 132 54.5
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 8.7e-22 107.8 78 73.1
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.5e-21 107.1 92 62.0
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 1.9e-21 106.7 134 53.0
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 2.5e-21 106.3 86 66.3
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.3e-21 105.9 75 72.0
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 3.3e-21 105.9 130 49.2
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 7.3e-21 104.8 73 71.2
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.3e-20 104.0 142 48.6
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 2.1e-20 103.2 124 55.6
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 2.1e-20 103.2 76 67.1
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 2.1e-20 103.2 134 49.3
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.8e-20 102.8 83 65.1
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 3.6e-20 102.4 89 61.8
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 4.8e-20 102.1 103 56.3
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.8e-20 102.1 76 69.7
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 4.8e-20 102.1 114 51.8
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 6.2e-20 101.7 131 45.8
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 6.2e-20 101.7 162 43.2
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 6.2e-20 101.7 87 57.5
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 8.1e-20 101.3 85 62.4
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 1.1e-19 100.9 87 59.8
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 1.8e-19 100.1 133 48.9
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.8e-19 100.1 125 44.0
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.8e-19 100.1 87 59.8
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 3.1e-19 99.4 65 73.8
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 3.1e-19 99.4 125 48.0
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 3.1e-19 99.4 110 53.6
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.0e-19 99.0 86 61.6
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 5.3e-19 98.6 122 53.3
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 6.9e-19 98.2 126 50.0
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 6.9e-19 98.2 90 55.6
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 9.0e-19 97.8 132 46.2
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 1.2e-18 97.4 131 48.1
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 1.2e-18 97.4 90 60.0
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 1.2e-18 97.4 74 66.2
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 1.5e-18 97.1 127 48.8
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 1.5e-18 97.1 127 48.8
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 1.5e-18 97.1 85 57.6
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 2.0e-18 96.7 75 66.7
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 2.0e-18 96.7 87 58.6
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 2.6e-18 96.3 97 49.5
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 3.4e-18 95.9 73 60.3
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 4.5e-18 95.5 137 47.4
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 4.5e-18 95.5 87 56.3
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 9.9e-18 94.4 66 66.7
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 2.9e-17 92.8 63 69.8
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 3.8e-17 92.4 130 46.9
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 3.8e-17 92.4 127 48.0
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 3.8e-17 92.4 127 48.0
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 4.9e-17 92.0 136 44.9
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 4.9e-17 92.0 135 46.7
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 4.9e-17 92.0 131 46.6
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 1.1e-16 90.9 127 47.2
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 1.1e-16 90.9 127 47.2
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.4e-16 90.5 131 45.8
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 2.4e-16 89.7 88 51.1
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 3.2e-16 89.4 132 45.5
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 5.4e-16 88.6 62 67.7
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 5.4e-16 88.6 150 44.0
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.2e-15 87.4 91 53.8
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 2.1e-15 86.7 120 48.3
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 2.3e-14 83.2 89 53.9
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.3e-14 83.2 74 58.1
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 3.0e-14 82.8 87 56.3
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 2.1e-12 76.6 103 46.6
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 2.1e-12 76.6 78 51.3
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 1.2e-10 70.9 67 52.2
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 2.0e-10 70.1 75 50.7
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 8.4e-09 64.7 126 40.5
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 1.6e-07 60.5 113 38.9
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.7e-07 59.7 93 45.2
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 4.6e-07 58.9 135 35.6
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 6.0e-07 58.5 63 50.8
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 7.9e-07 58.2 113 41.6
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 3.0e-06 56.2 122 38.5


User provided reference genes

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