Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G015800 Glycine max HOM05D006454 ORTHO05D008024 2.2e-184 649.4 498 100.0
Glyma.02G297900 Glycine max HOM05D006454 ORTHO05D008024 1.7e-160 570.1 499 92.2
VMungo0647G1066 Vigna mungo HOM05D006454 ORTHO05D008024 5.1e-149 531.9 498 88.8
Phvul.008G275700 Phaseolus vulgaris HOM05D006454 ORTHO05D008024 3.2e-143 512.7 504 82.3
arahy.Tifrunner.gnm1.ann1.AYWF3K Arachis hypogaea HOM05D006454 ORTHO05D008024 1.8e-117 427.2 514 75.7
arahy.Tifrunner.gnm1.ann1.IBL7LR Arachis hypogaea HOM05D006454 ORTHO05D008024 2.0e-116 423.7 513 75.4
LjContig00272g0005215 Lotus japonicus HOM05D006454 ORTHO05D008024 3.2e-111 406.4 500 74.4
Lalb_Chr04g0247971 Lupinus albus HOM05D006454 ORTHO05D008024 3.3e-108 396.4 463 73.4
TPR.G14154 Trifolium pratense HOM05D006454 ORTHO05D008024 1.1e-103 381.3 508 70.3
Medtr5g094610 Medicago truncatula HOM05D006454 ORTHO05D008024 8.8e-101 371.7 508 66.5
Haze_09788 Corylus avellana HOM05D006454 ORTHO05D008024 1.1e-100 371.3 525 66.1
Cfa020229 Carpinus fangiana HOM05D006454 ORTHO05D008024 1.7e-99 367.5 530 66.0
Gorai.013G155100 Gossypium raimondii HOM05D006454 ORTHO05D008024 3.8e-96 356.3 524 66.8
Ca_06374_v3 Cicer arietinum L. HOM05D006454 ORTHO05D000136 4.2e-95 352.8 409 75.3
Gohir.D13G138500 Gossypium hirsutum HOM05D006454 ORTHO05D008024 4.2e-95 352.8 524 66.8
Gohir.A13G134866 Gossypium hirsutum HOM05D006454 ORTHO05D008024 9.4e-95 351.7 524 66.4
CANSAT11G2145 Cannabis sativa HOM05D006454 ORTHO05D008024 1.6e-94 350.9 474 70.3
QL08p005504 Quercus lobata HOM05D006454 ORTHO05D008024 4.0e-93 346.3 477 67.3
Manes.15G063200 Manihot esculenta HOM05D006454 ORTHO05D008024 9.8e-92 341.7 515 68.3
MD11G1204700 Malus domestica HOM05D006454 ORTHO05D008024 2.8e-91 340.1 493 63.9
Thecc.07G022300 Theobroma cacao HOM05D006454 ORTHO05D008024 2.4e-90 337.0 516 64.7
Atru.chr2.3605 Acer truncatum HOM05D006454 ORTHO05D008024 9.1e-90 335.1 524 67.2
FAN21G2064 Fragaria x ananassa HOM05D006454 ORTHO05D008024 1.6e-89 334.3 496 63.5
Ciclev10008511m.g Citrus clementina HOM05D006454 ORTHO05D008024 2.7e-89 333.6 497 69.4
Psat2g008800 Pisum sativum HOM05D006454 ORTHO05D008024 2.7e-89 333.6 500 69.0
RcHm_v2.0_Chr5g0042641 Rosa chinensis HOM05D006454 ORTHO05D008024 2.2e-88 330.5 497 64.2
FvH4_3g24060 Fragaria vesca HOM05D006454 ORTHO05D008024 2.9e-88 330.1 496 63.3
FAN11G0689 Fragaria x ananassa HOM05D006454 ORTHO05D008024 2.9e-88 330.1 496 63.3
FAN25G3289 Fragaria x ananassa HOM05D006454 ORTHO05D008024 2.5e-87 327.0 496 62.7
FAN25G1123 Fragaria x ananassa HOM05D006454 ORTHO05D008024 4.2e-87 326.2 502 62.5
MD03G1188700 Malus domestica HOM05D006454 ORTHO05D008024 4.2e-87 326.2 494 67.0
Potri.001G361800 Populus trichocarpa HOM05D006454 ORTHO05D008024 6.1e-86 322.4 509 64.6
MELO3C024909.2 Cucumis melo HOM05D006454 ORTHO05D008024 2.0e-84 317.4 538 57.6
Aqoxy4G02215 Aquilegia oxysepala HOM05D006454 ORTHO05D008024 3.4e-84 316.6 489 68.3
TWI39G0040 Tripterygium wilfordii HOM05D006454 ORTHO05D008024 3.4e-84 316.6 467 70.2
BcaC01g06383 Brassica carinata HOM05D006454 ORTHO05D008024 4.4e-84 316.2 489 64.0
TAR626G0559 Trochodendron aralioides HOM05D006454 ORTHO05D008024 4.4e-84 316.2 469 65.7
Sabra11G0073300 Salix brachista HOM05D006454 ORTHO05D008024 5.7e-84 315.8 503 65.2
Prupe.4G234400 Prunus persica HOM05D006454 ORTHO05D008024 1.3e-83 314.7 484 62.8
C03p16380 Brassica napus HOM05D006454 ORTHO05D008024 2.2e-83 313.9 489 63.8
BolC3t14060H Brassica oleracea HOM05D006454 ORTHO05D008024 2.2e-83 313.9 489 63.8
Eucgr.F03524 Eucalyptus grandis HOM05D006454 ORTHO05D008024 2.2e-83 313.9 475 71.4
Sabra11G0078800 Salix brachista HOM05D006454 ORTHO05D008024 3.7e-83 313.2 509 64.4
THA.LOC104813444 Tarenaya hassleriana HOM05D006454 ORTHO05D008024 6.3e-83 312.4 515 64.9
ClCG09G021120 Citrullus lanatus HOM05D006454 ORTHO05D008024 1.4e-82 311.2 522 64.9
Sp6g17500 Schrenkiella parvula HOM05D006454 ORTHO05D008024 2.4e-82 310.5 499 61.9
Sed0021870 Sechium edule HOM05D006454 ORTHO05D008024 5.4e-82 309.3 531 62.0
BcaB01g04358 Brassica carinata HOM05D006454 ORTHO05D008024 7.0e-82 308.9 493 64.5
AL8G31150 Arabidopsis lyrata HOM05D006454 ORTHO05D008024 3.5e-81 306.6 495 61.4
Aa31LG3G11530 Aethionema arabicum HOM05D006454 ORTHO05D008024 5.9e-81 305.8 498 62.0
CsaV3_7G018450 Cucumis sativus L. HOM05D006454 ORTHO05D008024 7.7e-81 305.4 529 62.6
A03p13940 Brassica napus HOM05D006454 ORTHO05D008024 1.0e-80 305.1 491 64.0
BraA03t10695Z Brassica rapa HOM05D006454 ORTHO05D008024 3.8e-80 303.1 491 64.0
CiPaw.11G201000 Carya illinoinensis HOM05D006454 ORTHO05D008024 2.5e-79 300.4 357 80.4
AT5G55580 Arabidopsis thaliana HOM05D006454 ORTHO05D008024 4.3e-79 299.7 498 62.7
Carub.0008s1595 Capsella rubella HOM05D006454 ORTHO05D008024 7.3e-79 298.9 500 59.8
DCAR_013215 Daucus carota HOM05D006454 ORTHO05D008024 7.3e-79 298.9 464 64.7
MBI16_g11566_MAGBIO Magnolia biondii HOM05D006454 ORTHO05D008024 1.5e-76 291.2 484 63.6
Oeu054328.1 Olea europaea HOM05D006454 ORTHO05D008024 2.6e-76 290.4 507 61.1
AUR62017060 Chenopodium quinoa HOM05D006454 ORTHO05D008024 7.5e-76 288.9 490 62.7
Nitab4.5_0002517g0040 Nicotiana tabacum HOM05D006454 ORTHO05D008024 1.3e-75 288.1 486 64.0
AUR62040658 Chenopodium quinoa HOM05D006454 ORTHO05D008024 4.9e-75 286.2 508 59.6
Thhalv10013311m.g Eutrema salsugineum HOM05D006454 ORTHO05D008024 6.4e-75 285.8 500 50.8
Cc05_g14700 Coffea canephora HOM05D006454 ORTHO05D008024 8.3e-75 285.4 486 64.2
SalBow8G0989 Salvia bowleyana HOM05D006454 ORTHO05D008024 8.3e-75 285.4 466 60.5
MSTRG.6985 Avicennia marina HOM05D006454 ORTHO05D008024 7.0e-74 282.3 478 64.0
PSO675G2716 Papaver somniferum HOM05D006454 ORTHO05D008024 7.0e-74 282.3 474 65.6
Actinidia05032 Actinidia chinensis HOM05D006454 ORTHO05D008024 2.0e-73 280.8 524 60.5
Lsat_1_v5_gn_5_8060 Lactuca sativa HOM05D006454 ORTHO05D008024 5.9e-73 279.3 496 62.9
ECA246G2030 Erigeron canadensis HOM05D006454 ORTHO05D008024 1.0e-72 278.5 453 59.2
PSO541G2941 Papaver somniferum HOM05D006454 ORTHO05D008024 5.0e-72 276.2 472 65.5
EL10Ac4g07613 Beta vulgaris HOM05D006454 ORTHO05D008024 1.5e-71 274.6 509 63.3
CARHR268890 Cardamine hirsuta HOM05D006454 ORTHO05D008024 1.9e-71 274.2 333 78.4
Nitab4.5_0000163g0310 Nicotiana tabacum HOM05D006454 ORTHO05D008024 1.9e-71 274.2 490 57.8
PGR031G1939 Punica granatum HOM05D006454 ORTHO05D008024 3.6e-70 270.0 529 59.0
Ah.04g166440 Amaranthus hybridus HOM05D006454 ORTHO05D008024 4.7e-70 269.6 507 62.7
CSS0002313 Camellia sinensis var. sinensis HOM05D006454 ORTHO05D000036 8.0e-70 268.9 406 63.1
CiPaw.12G136000 Carya illinoinensis HOM05D006454 ORTHO05D008024 4.0e-69 266.5 537 53.3
Migut.M01675 Erythranthe guttata HOM05D006454 ORTHO05D008024 8.9e-69 265.4 478 56.3
HanXRQChr08g0235811 Helianthus annuus HOM05D006454 ORTHO05D008024 2.0e-68 264.2 493 56.8
Solyc12g015640.2 Solanum lycopersicum HOM05D006454 ORTHO05D008024 1.2e-65 255.0 469 57.8
Sopen12g007540 Solanum pennellii HOM05D006454 ORTHO05D008024 2.7e-65 253.8 453 63.4
Peaxi162Scf00955g00214 Petunia axillaris HOM05D006454 ORTHO05D008024 4.6e-65 253.1 463 59.4
CDE12G0728 Ceratophyllum demersum HOM05D006454 ORTHO05D008024 1.3e-64 251.5 488 59.0
COL.COLO4_09787 Corchorus olitorius HOM05D006454 ORTHO05D008024 3.9e-64 250.0 489 60.5
SGA_v2.0_scaffold171G38887 Striga asiatica HOM05D006454 ORTHO05D008024 2.5e-63 247.3 487 58.9
CAN.G1239.14 Capsicum annuum HOM05D006454 ORTHO05D008024 5.6e-63 246.1 463 59.6
GSVIVG01037780001 Vitis vinifera HOM05D006454 ORTHO05D008024 5.6e-63 246.1 410 65.1
Lj1A885G30 Lonicera japonica HOM05D006454 ORTHO05D008024 9.5e-63 245.4 413 62.2
vmacro11560 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 2.8e-62 243.8 407 64.4
ATR1149G086 Amborella trichopoda HOM05D006454 ORTHO05D008024 1.1e-61 241.9 488 54.3
Dinv40835 Davidia involucrata HOM05D006454 ORTHO05D008024 2.1e-57 227.6 292 78.1
HPP92_007883 Vanilla planifolia HOM05D006454 ORTHO05D008024 2.5e-55 220.7 322 78.0
Rhsim06G0226800 Rhododendron simsii HOM05D006454 ORTHO05D008024 1.8e-53 214.5 405 57.5
Sc16g0003560 Simmondsia chinensis HOM05D006454 ORTHO05D008024 3.8e-51 206.8 379 60.2
Actinidia00093 Actinidia chinensis HOM05D006454 ORTHO05D008024 2.5e-47 194.1 410 61.0
Hund01917 Selenicereus undatus HOM05D006454 ORTHO05D008024 2.1e-46 191.0 325 68.0
PGSC0003DMG401029813 Solanum tuberosum HOM05D006454 ORTHO05D008024 1.1e-45 188.7 292 75.3
Oeu031063.1 Olea europaea HOM05D006454 ORTHO05D008024 5.2e-45 186.4 292 79.8
Cpa.g.sc12.193 Carica papaya HOM05D006454 ORTHO05D008024 2.0e-44 184.5 211 55.9
HPP92_007898 Vanilla planifolia HOM05D006454 ORTHO05D008024 1.2e-41 175.3 285 81.4
Zm00001eb107900 Zea mays HOM05D006454 ORTHO05D008024 3.9e-40 170.2 461 58.8
Os07g0583200 Oryza sativa ssp. japonica HOM05D006454 ORTHO05D008024 8.7e-40 169.1 333 67.9
CAN.G489.2 Capsicum annuum HOM05D006454 ORTHO05D008024 9.6e-39 165.6 299 51.8
Prupe.4G234100 Prunus persica HOM05D006454 ORTHO05D008024 3.6e-38 163.7 137 83.9
Hund01916 Selenicereus undatus HOM05D006454 ORTHO05D008024 3.4e-36 157.1 473 29.8
BcaNung06723 Brassica carinata HOM05D000081 ORTHO05D008024 2.4e-29 134.4 327 41.3
Nn1g07440 Nelumbo nucifera HOM05D006454 ORTHO05D008024 2.4e-29 134.4 92 90.2
unitig_899.g15274 Utricularia gibba HOM05D006454 ORTHO05D008024 5.3e-29 133.3 92 72.8
Cpa.g.sc12.192 Carica papaya HOM05D006454 ORTHO05D008024 1.6e-25 121.7 92 81.5
BolC2t07758H Brassica oleracea HOM05D006454 ORTHO05D008024 1.9e-23 114.8 127 51.2
VMungo1080G1759 Vigna mungo HOM05D006454 ORTHO05D008024 1.1e-21 109.0 73 75.3
Pp3c7_3780 Physcomitrium patens HOM05D006454 ORTHO05D008024 4.9e-19 100.1 330 60.0
SEGI_11937 Sequoiadendron giganteum HOM05D047912 ORTHO05D008024 1.4e-18 98.6 336 55.7
BcaNung06724 Brassica carinata HOM05D006454 ORTHO05D008024 1.6e-17 95.1 55 80.0
Pp3c11_22990 Physcomitrium patens HOM05D006454 ORTHO05D008024 5.1e-16 90.1 407 48.2
Mapoly0042s0040 Marchantia polymorpha HOM05D006454 ORTHO05D008024 2.8e-14 84.3 375 48.8
vmacro10144 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 7.2e-10 69.7 128 38.3
BcaNung06726 Brassica carinata HOM05D006454 ORTHO05D008024 3.3e-07 60.8 133 39.8
AagrBONN_evm.TU.Sc2ySwM_117.1902 Anthoceros agrestis HOM05D006454 ORTHO05D008024 5.7e-07 60.1 164 25.6
Oeu034554.1 Olea europaea HOM05D006454 ORTHO05D008024 8.2e-06 56.2 91 39.6


User provided reference genes

Program Settings