Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.4e-56 220.7 127 100.0
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.1e-52 209.9 127 84.3
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 2.3e-45 185.7 121 77.7
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 3.3e-44 181.8 116 81.0
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 4.6e-38 161.4 120 70.8
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.8e-37 159.5 122 71.3
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 5.1e-37 157.9 122 70.5
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.4e-34 149.1 118 66.9
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 4.5e-33 144.8 120 74.2
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 5.8e-33 144.4 115 66.1
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 6.0e-30 134.4 123 62.6
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.8e-29 132.9 125 57.6
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.8e-29 132.9 127 58.3
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.8e-29 132.9 123 60.2
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 3.0e-29 132.1 125 59.2
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 3.0e-29 132.1 120 60.0
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 3.0e-29 132.1 120 60.0
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 3.9e-29 131.7 119 60.5
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 5.1e-29 131.3 127 58.3
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.1e-29 131.3 120 60.0
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 6.7e-29 131.0 120 60.0
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 8.7e-29 130.6 123 59.3
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.1e-28 130.2 127 58.3
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.1e-28 130.2 119 60.5
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.5e-28 129.8 120 59.2
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.5e-28 129.0 127 57.5
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 3.3e-28 128.6 120 58.3
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 3.3e-28 128.6 120 60.0
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 3.3e-28 128.6 120 60.0
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 7.4e-28 127.5 127 56.7
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 7.4e-28 127.5 118 57.6
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 9.6e-28 127.1 117 60.7
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 9.6e-28 127.1 131 55.7
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 9.6e-28 127.1 120 58.3
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.3e-27 126.7 122 59.0
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-27 126.7 122 59.0
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-27 126.7 122 59.0
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-27 126.7 122 59.0
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-27 126.7 122 59.0
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 2.1e-27 125.9 114 59.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 2.1e-27 125.9 119 59.7
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 2.8e-27 125.6 125 59.2
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.8e-27 125.6 130 56.9
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 4.8e-27 124.8 115 57.4
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 4.8e-27 124.8 115 60.0
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 4.8e-27 124.8 121 59.5
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 4.8e-27 124.8 130 56.9
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 6.2e-27 124.4 127 55.1
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 6.2e-27 124.4 119 58.0
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 8.2e-27 124.0 122 58.2
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.1e-26 123.6 122 55.7
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 2.4e-26 122.5 78 76.9
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 2.4e-26 122.5 116 56.9
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.4e-26 122.5 118 57.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 4.0e-26 121.7 78 74.4
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 5.3e-26 121.3 124 58.1
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 5.3e-26 121.3 122 59.0
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 5.3e-26 121.3 123 56.9
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 6.9e-26 120.9 114 56.1
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 6.9e-26 120.9 128 55.5
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.2e-25 120.2 131 54.2
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.2e-25 120.2 126 56.3
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.5e-25 119.8 126 56.3
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 2.0e-25 119.4 121 54.5
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.0e-25 119.4 102 64.7
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 2.6e-25 119.0 119 56.3
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 3.4e-25 118.6 121 56.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.0e-24 117.1 119 52.9
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.3e-24 116.7 125 52.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.3e-24 116.7 119 54.6
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 2.2e-24 115.9 90 65.6
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 8.4e-24 114.0 124 54.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 8.4e-24 114.0 120 55.8
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.1e-23 113.6 120 55.0
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.4e-23 113.2 78 70.5
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 4.2e-23 111.7 52 100.0
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 5.5e-23 111.3 120 53.3
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 5.5e-23 111.3 92 66.3
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 7.1e-23 110.9 116 54.3
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 9.3e-23 110.5 81 66.7
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.2e-22 110.2 91 62.6
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.6e-22 109.8 52 94.2
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 1.6e-22 109.8 100 59.0
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.6e-22 109.8 73 72.6
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.8e-21 106.3 52 90.4
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 3.9e-21 105.1 162 42.0
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 6.7e-21 104.4 52 92.3
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 1.5e-20 103.2 69 71.0
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.5e-20 103.2 48 97.9
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.5e-20 103.2 67 73.1
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.3e-20 102.1 49 93.9
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 6.3e-19 97.8 117 47.9
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.0e-16 90.5 70 58.6
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 1.9e-15 86.3 52 69.2
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.1e-14 82.8 52 67.3
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 9.7e-12 73.9 49 63.3
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 5.0e-08 61.6 58 50.0
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 2.7e-06 55.8 85 37.6


User provided reference genes

Program Settings