Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G357300 Glycine max HOM05D003870 ORTHO05D004567 9.5e-98 360.1 179 100.0
Glyma.15G016300 Glycine max HOM05D003870 ORTHO05D004567 1.8e-67 259.6 132 97.7
VMungo1080G1700 Vigna mungo HOM05D003870 ORTHO05D004567 1.8e-64 249.6 139 92.8
VMungo0331G0764 Vigna mungo HOM05D003870 ORTHO05D004567 2.2e-62 242.7 137 89.8
Glyma.07G019700 Glycine max HOM05D003870 ORTHO05D004567 8.4e-62 240.7 137 89.1
Manes.11G038100 Manihot esculenta HOM05D003870 ORTHO05D004567 1.1e-61 240.4 137 89.8
Manes.04G129900 Manihot esculenta HOM05D003870 ORTHO05D004567 5.5e-61 238.0 137 89.1
Glyma.08G204800 Glycine max HOM05D003870 ORTHO05D004567 1.2e-60 236.9 137 87.6
Phvul.010G148800 Phaseolus vulgaris HOM05D003870 ORTHO05D004567 1.6e-60 236.5 137 87.6
Potri.003G052500 Populus trichocarpa HOM05D003870 ORTHO05D004567 2.1e-60 236.1 137 86.9
CANSAT56G1465 Cannabis sativa HOM05D003870 ORTHO05D004567 3.5e-60 235.3 137 86.9
CiPaw.01G235900 Carya illinoinensis HOM05D003870 ORTHO05D004567 4.6e-60 235.0 138 86.2
Prupe.3G067400 Prunus persica HOM05D003870 ORTHO05D004567 7.9e-60 234.2 137 86.1
Ciclev10026722m.g Citrus clementina HOM05D003870 ORTHO05D004567 1.0e-59 233.8 137 85.4
Dinv38024 Davidia involucrata HOM05D003870 ORTHO05D004567 1.3e-59 233.4 137 86.1
PGR102G1204 Punica granatum HOM05D003870 ORTHO05D004567 1.8e-59 233.0 137 86.9
ClCG07G013150 Citrullus lanatus HOM05D003870 ORTHO05D004567 2.3e-59 232.6 137 84.7
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea HOM05D003870 ORTHO05D004567 3.0e-59 232.3 137 86.1
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea HOM05D003870 ORTHO05D004567 3.0e-59 232.3 137 86.1
Cfa002093 Carpinus fangiana HOM05D003870 ORTHO05D004567 3.0e-59 232.3 137 86.1
Haze_16364 Corylus avellana HOM05D003870 ORTHO05D004567 3.0e-59 232.3 137 86.1
MELO3C012971.2 Cucumis melo HOM05D003870 ORTHO05D004567 3.9e-59 231.9 137 84.7
Cpa.g.sc1182.1 Carica papaya HOM05D003870 ORTHO05D004567 5.1e-59 231.5 137 83.2
Sabra03G0026800 Salix brachista HOM05D003870 ORTHO05D004567 8.7e-59 230.7 137 84.7
CsaV3_3G025000 Cucumis sativus L. HOM05D003870 ORTHO05D004567 1.5e-58 229.9 137 83.9
Eucgr.F03038 Eucalyptus grandis HOM05D003870 ORTHO05D004567 1.5e-58 229.9 136 85.3
Sed0024359 Sechium edule HOM05D003870 ORTHO05D004567 1.9e-58 229.6 137 83.9
COL.COLO4_30434 Corchorus olitorius HOM05D003870 ORTHO05D004567 3.3e-58 228.8 138 83.3
Gohir.A05G131700 Gossypium hirsutum HOM05D003870 ORTHO05D004567 3.3e-58 228.8 138 83.3
FAN09G1730 Fragaria x ananassa HOM05D003870 ORTHO05D004567 4.3e-58 228.4 137 83.2
RcHm_v2.0_Chr2g0138931 Rosa chinensis HOM05D003870 ORTHO05D004567 4.3e-58 228.4 137 83.2
Sed0005638 Sechium edule HOM05D003870 ORTHO05D004567 4.3e-58 228.4 137 83.2
Thecc.06G092200 Theobroma cacao HOM05D003870 ORTHO05D004567 4.3e-58 228.4 138 82.6
Gohir.D05G131200 Gossypium hirsutum HOM05D003870 ORTHO05D004567 5.7e-58 228.0 138 82.6
Gorai.009G134900 Gossypium raimondii HOM05D003870 ORTHO05D004567 5.7e-58 228.0 138 82.6
QL05p021780 Quercus lobata HOM05D003870 ORTHO05D004567 5.7e-58 228.0 137 83.9
Duzib235G0817 Durio zibethinus HOM05D003870 ORTHO05D004567 7.4e-58 227.6 138 81.9
DCAR_023061 Daucus carota HOM05D003870 ORTHO05D004567 9.6e-58 227.3 137 82.5
FAN05G2130 Fragaria x ananassa HOM05D003870 ORTHO05D004567 9.6e-58 227.3 137 82.5
Lalb_Chr14g0373231 Lupinus albus HOM05D003870 ORTHO05D004567 9.6e-58 227.3 137 85.4
Medtr2g101820 Medicago truncatula HOM05D003870 ORTHO05D004567 9.6e-58 227.3 140 85.7
FAN14G2389 Fragaria x ananassa HOM05D003870 ORTHO05D004567 1.3e-57 226.9 137 82.5
Lj3g0012525 Lotus japonicus HOM05D003870 ORTHO05D004567 1.3e-57 226.9 141 83.7
FvH4_6g31740 Fragaria vesca HOM05D003870 ORTHO05D004567 1.6e-57 226.5 137 82.5
Psat5g298080 Pisum sativum HOM05D003870 ORTHO05D004567 1.6e-57 226.5 139 82.7
Migut.D01017 Erythranthe guttata HOM05D003870 ORTHO05D004567 2.1e-57 226.1 137 81.8
FAN02G0928 Fragaria x ananassa HOM05D003870 ORTHO05D004567 2.1e-57 226.1 137 82.5
Lalb_Chr25g0279971 Lupinus albus HOM05D003870 ORTHO05D004567 2.1e-57 226.1 138 83.3
Aqoxy7G01609 Aquilegia oxysepala HOM05D003870 ORTHO05D004567 3.7e-57 225.3 137 83.2
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 3.7e-57 225.3 138 84.8
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 3.7e-57 225.3 138 84.8
MD09G1209500 Malus domestica HOM05D003870 ORTHO05D004567 3.7e-57 225.3 137 82.5
Duzib160G0587 Durio zibethinus HOM05D003870 ORTHO05D004567 4.8e-57 224.9 138 81.2
Nn3g18073 Nelumbo nucifera HOM05D003870 ORTHO05D004567 8.2e-57 224.2 138 85.5
CSS0035581 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 1.1e-56 223.8 137 82.5
Nn2g11696 Nelumbo nucifera HOM05D003870 ORTHO05D004567 1.1e-56 223.8 137 83.9
GSVIVG01017071001 Vitis vinifera HOM05D003870 ORTHO05D004567 1.8e-56 223.0 138 81.9
SGA_v2.0_scaffold5G02558 Striga asiatica HOM05D003870 ORTHO05D004567 2.4e-56 222.6 138 80.4
MBI01_g07179_MAGBIO Magnolia biondii HOM05D003870 ORTHO05D004567 5.3e-56 221.5 138 81.9
Nitab4.5_0000351g0060 Nicotiana tabacum HOM05D003870 ORTHO05D004567 5.3e-56 221.5 138 82.6
PSO832G3918 Papaver somniferum HOM05D003870 ORTHO05D004567 5.3e-56 221.5 138 83.3
CiPaw.02G148900 Carya illinoinensis HOM05D003870 ORTHO05D004567 6.9e-56 221.1 138 81.9
PSO782G2129 Papaver somniferum HOM05D003870 ORTHO05D004567 6.9e-56 221.1 138 83.3
TAR383G0495 Trochodendron aralioides HOM05D003870 ORTHO05D004567 9.0e-56 220.7 137 83.9
CSS0004601 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 1.2e-55 220.3 137 81.0
CSS0022866 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 1.2e-55 220.3 137 81.0
Nitab4.5_0001315g0130 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.2e-55 220.3 138 83.3
TAR636G2531 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.2e-55 220.3 137 83.2
Lsat_1_v5_gn_5_130901 Lactuca sativa HOM05D003870 ORTHO05D004567 1.5e-55 219.9 134 82.1
TAR626G1423 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.5e-55 219.9 137 83.9
BcaB04g18888 Brassica carinata HOM05D003870 ORTHO05D004567 2.0e-55 219.5 138 81.2
Migut.I00942 Erythranthe guttata HOM05D003870 ORTHO05D004567 2.6e-55 219.2 137 78.8
Nitab4.5_0018837g0020 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.6e-55 219.2 138 82.6
MSTRG.11054 Avicennia marina HOM05D003870 ORTHO05D004567 3.4e-55 218.8 138 78.3
BcaC01g01311 Brassica carinata HOM05D003870 ORTHO05D004567 3.4e-55 218.8 138 81.2
BcaC01g01313 Brassica carinata HOM05D003870 ORTHO05D004567 3.4e-55 218.8 138 81.2
HanXRQChr12g0360771 Helianthus annuus HOM05D003870 ORTHO05D004567 3.4e-55 218.8 137 78.8
Ah.01g021620 Amaranthus hybridus HOM05D003870 ORTHO05D004567 5.8e-55 218.0 137 78.8
A08p02270 Brassica napus HOM05D003870 ORTHO05D004567 5.8e-55 218.0 138 80.4
Thhalv10021715m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 7.6e-55 217.6 138 80.4
Peaxi162Scf00015g00032 Petunia axillaris HOM05D003870 ORTHO05D004567 7.6e-55 217.6 138 82.6
CAN.G1152.5 Capsicum annuum HOM05D003870 ORTHO05D004567 1.0e-54 217.2 138 81.9
Sp1g38770 Schrenkiella parvula HOM05D003870 ORTHO05D004567 1.0e-54 217.2 138 79.7
C03p90500 Brassica napus HOM05D003870 ORTHO05D004567 1.7e-54 216.5 138 80.4
BolC3t21374H Brassica oleracea HOM05D003870 ORTHO05D004567 1.7e-54 216.5 138 80.4
BraA08t32272Z Brassica rapa HOM05D003870 ORTHO05D004567 2.2e-54 216.1 138 79.7
Nitab4.5_0002859g0140 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.2e-54 216.1 138 81.9
Nitab4.5_0003418g0030 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.2e-54 216.1 138 81.9
PGSC0003DMG400002626 Solanum tuberosum HOM05D003870 ORTHO05D004567 2.2e-54 216.1 138 81.9
TWI12G1021 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 2.2e-54 216.1 137 78.1
Thhalv10011814m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 2.9e-54 215.7 138 79.7
Peaxi162Scf00034g00513 Petunia axillaris HOM05D003870 ORTHO05D004567 2.9e-54 215.7 138 81.9
Solyc03g120640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 2.9e-54 215.7 138 81.9
BcaC05g28907 Brassica carinata HOM05D003870 ORTHO05D004567 3.8e-54 215.3 138 79.7
C05p50360 Brassica napus HOM05D003870 ORTHO05D004567 3.8e-54 215.3 138 79.7
C06p07460 Brassica napus HOM05D003870 ORTHO05D004567 3.8e-54 215.3 138 79.0
BolC5t33784H Brassica oleracea HOM05D003870 ORTHO05D004567 3.8e-54 215.3 138 79.7
BolC6t35835H Brassica oleracea HOM05D003870 ORTHO05D004567 3.8e-54 215.3 138 79.0
ECA234G4669 Erigeron canadensis HOM05D003870 ORTHO05D004567 3.8e-54 215.3 134 79.1
Actinidia21679 Actinidia chinensis HOM05D003870 ORTHO05D004567 5.0e-54 214.9 138 79.0
AUR62011659 Chenopodium quinoa HOM05D003870 ORTHO05D004567 5.0e-54 214.9 137 79.6
A06p01960 Brassica napus HOM05D003870 ORTHO05D004567 6.5e-54 214.5 138 79.0
BraA06t23412Z Brassica rapa HOM05D003870 ORTHO05D004567 6.5e-54 214.5 138 79.0
Carub.0001s4120 Capsella rubella HOM05D003870 ORTHO05D004567 6.5e-54 214.5 138 79.0
CAN.G438.27 Capsicum annuum HOM05D003870 ORTHO05D004567 6.5e-54 214.5 138 81.9
Eucgr.J02958 Eucalyptus grandis HOM05D003870 ORTHO05D004567 6.5e-54 214.5 138 80.4
Sp3g14500 Schrenkiella parvula HOM05D003870 ORTHO05D004567 6.5e-54 214.5 138 79.7
Aa31LG10G2680 Aethionema arabicum HOM05D003870 ORTHO05D004567 8.4e-54 214.2 138 77.5
AT1G52230 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 8.4e-54 214.2 138 79.0
Cc04_g03050 Coffea canephora HOM05D003870 ORTHO05D004567 8.4e-54 214.2 138 79.7
Oeu029644.1 Olea europaea HOM05D003870 ORTHO05D004567 1.1e-53 213.8 138 78.3
vmacro16969 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 1.1e-53 213.8 137 80.3
AT3G16140 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 1.4e-53 213.4 138 77.5
PGSC0003DMG400016504 Solanum tuberosum HOM05D003870 ORTHO05D004567 1.4e-53 213.4 138 80.4
BraA01t03856Z Brassica rapa HOM05D003870 ORTHO05D004567 2.5e-53 212.6 138 77.5
Solyc06g066640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 2.5e-53 212.6 138 80.4
AL3G28820 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 3.2e-53 212.2 138 77.5
A05p33360 Brassica napus HOM05D003870 ORTHO05D004567 3.2e-53 212.2 138 79.0
BraA05t22161Z Brassica rapa HOM05D003870 ORTHO05D004567 3.2e-53 212.2 138 79.0
BcaB06g25707 Brassica carinata HOM05D003870 ORTHO05D004567 4.2e-53 211.8 138 79.0
Sopen06g024910 Solanum pennellii HOM05D003870 ORTHO05D004567 5.5e-53 211.5 138 79.7
CARHR042360 Cardamine hirsuta HOM05D003870 ORTHO05D004567 7.1e-53 211.1 138 78.3
THA.LOC104817982 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 7.1e-53 211.1 138 79.0
unitig_0.g2124 Utricularia gibba HOM05D003870 ORTHO05D004567 1.2e-52 210.3 138 78.3
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 1.6e-52 209.9 136 78.7
A01p37960 Brassica napus HOM05D003870 ORTHO05D004567 1.6e-52 209.9 138 76.8
Carub.0003s1588 Capsella rubella HOM05D003870 ORTHO05D004567 1.6e-52 209.9 138 76.1
CARHR091300 Cardamine hirsuta HOM05D003870 ORTHO05D004567 1.6e-52 209.9 138 76.1
PGSC0003DMG400007571 Solanum tuberosum HOM05D003870 ORTHO05D004567 1.6e-52 209.9 136 80.9
SGA_v2.0_scaffold69G23361 Striga asiatica HOM05D003870 ORTHO05D004567 1.6e-52 209.9 139 77.0
Oeu024071.1 Olea europaea HOM05D003870 ORTHO05D004567 2.1e-52 209.5 133 78.9
Solyc12g044280.2 Solanum lycopersicum HOM05D003870 ORTHO05D004567 2.1e-52 209.5 135 80.0
Sopen12g022520 Solanum pennellii HOM05D003870 ORTHO05D004567 2.1e-52 209.5 135 80.0
THA.LOC104810527 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 2.1e-52 209.5 139 80.6
TWI75G1362 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 4.6e-52 208.4 138 77.5
Rhsim12G0200100 Rhododendron simsii HOM05D003870 ORTHO05D004567 6.1e-52 208.0 137 78.1
vmacro18888 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 6.1e-52 208.0 138 78.3
EL10Ac9g22029 Beta vulgaris HOM05D003870 ORTHO05D004567 6.7e-51 204.5 137 74.5
Rhsim08G0223300 Rhododendron simsii HOM05D003870 ORTHO05D004567 6.7e-51 204.5 138 77.5
Lsat_1_v5_gn_1_35241 Lactuca sativa HOM05D003870 ORTHO05D004567 8.7e-51 204.1 137 78.1
CDE02G4568 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 4.3e-50 201.8 138 74.6
Hund00643 Selenicereus undatus HOM05D003870 ORTHO05D004567 4.8e-49 198.4 140 74.3
Sc15g0001350 Simmondsia chinensis HOM05D003870 ORTHO05D004567 1.8e-48 196.4 138 76.1
ATR0315G019 Amborella trichopoda HOM05D003870 ORTHO05D004567 6.9e-48 194.5 137 75.9
Zm00001eb295610 Zea mays HOM05D003870 ORTHO05D004567 9.0e-48 194.1 139 72.7
Os05g0560000 Oryza sativa ssp. japonica HOM05D003870 ORTHO05D004567 2.0e-47 193.0 136 73.5
Actinidia32731 Actinidia chinensis HOM05D003870 ORTHO05D004567 3.4e-47 192.2 122 79.5
CDE04G3706 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 3.4e-47 192.2 138 71.7
Sopen00g011820 Solanum pennellii HOM05D003870 ORTHO05D004567 6.5e-46 188.0 95 94.7
AUR62016482 Chenopodium quinoa HOM05D003870 ORTHO05D004567 4.2e-45 185.3 132 71.2
TPR.G37200 Trifolium pratense HOM05D003870 ORTHO05D004567 9.4e-45 184.1 139 74.1
Nitab4.5_0001968g0090 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.2e-44 183.7 138 74.6
AL1G60400 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 1.4e-43 180.3 95 88.4
SEGI_14279 Sequoiadendron giganteum HOM05D003870 ORTHO05D004567 3.3e-42 175.6 139 64.7
BcaC08g43379 Brassica carinata HOM05D003870 ORTHO05D004567 7.4e-42 174.5 94 87.2
HPP92_021482 Vanilla planifolia HOM05D003870 ORTHO05D004567 3.4e-39 165.6 160 59.4
Duzib192G0641 Durio zibethinus HOM05D003870 ORTHO05D004567 3.0e-35 152.5 98 78.6
Pp3c15_19390 Physcomitrium patens HOM05D003870 ORTHO05D004567 7.0e-32 141.4 131 52.7
Pp3c9_19520 Physcomitrium patens HOM05D003870 ORTHO05D004567 4.5e-31 138.7 132 54.5
Mapoly0009s0008 Marchantia polymorpha HOM05D003870 ORTHO05D004567 7.7e-31 137.9 137 57.7
Dinv30483 Davidia involucrata HOM05D003870 ORTHO05D004567 1.7e-30 136.7 85 80.0
CBR_g31512 Chara braunii HOM05D003870 ORTHO05D004567 1.5e-29 133.7 135 54.8
MD17G1191200 Malus domestica HOM05D003870 ORTHO05D004567 1.5e-29 133.7 85 78.8
C01p48190 Brassica napus HOM05D003870 ORTHO05D004567 5.5e-29 131.7 134 57.5
BolC1t04783H Brassica oleracea HOM05D003870 ORTHO05D004567 7.2e-29 131.3 135 57.0
HanXRQChr10g0313451 Helianthus annuus HOM05D003870 ORTHO05D004567 9.7e-26 120.9 84 70.2
ECA247G2331 Erigeron canadensis HOM05D003870 ORTHO05D004567 3.1e-24 115.9 73 76.7
Peaxi162Scf00207g00951 Petunia axillaris HOM05D003870 ORTHO05D004567 7.0e-24 114.8 138 58.0
MD17G1191400 Malus domestica HOM05D003870 ORTHO05D004567 3.0e-19 99.4 52 94.2
MD10G1187500 Malus domestica HOM05D003870 ORTHO05D004567 2.7e-15 86.3 74 62.2
MD14G1193300 Malus domestica HOM05D003870 ORTHO05D004567 3.8e-14 82.4 55 76.4
MCO07G351 Micromonas commoda HOM05D003870 ORTHO05D004567 1.6e-12 77.0 120 39.2
MD02G1178900 Malus domestica HOM05D003870 ORTHO05D004567 3.4e-10 69.3 33 93.9
Cre07.g330250 Chlamydomonas reinhardtii HOM05D003870 ORTHO05D004567 4.4e-10 68.9 88 42.0
Zm00001eb343540 Zea mays HOM05D003870 ORTHO05D004567 1.8e-08 63.5 97 45.4
unitig_747.g21485 Utricularia gibba HOM05D003870 ORTHO05D004567 3.1e-08 62.8 132 34.1


User provided reference genes

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