Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G351125 Glycine max HOM05D000315 ORTHO05D008220 2.2e-54 215.3 102 100.0
Glyma.15G023500 Glycine max HOM05D000315 ORTHO05D008220 4.8e-46 187.6 97 87.6
Lalb_Chr22g0351751 Lupinus albus HOM05D000315 ORTHO05D008220 8.5e-43 176.8 100 82.0
Psat5g293320 Pisum sativum HOM05D000315 ORTHO05D008220 1.3e-38 162.9 97 76.3
VMungo1080G0105 Vigna mungo HOM05D000315 ORTHO05D008220 4.8e-38 161.0 97 77.3
Phvul.005G160400 Phaseolus vulgaris HOM05D000315 ORTHO05D008220 1.4e-37 159.5 97 78.4
Lj3g0020089 Lotus japonicus HOM05D000315 ORTHO05D008220 9.1e-37 156.8 99 74.7
Ca_01189_v3 Cicer arietinum L. HOM05D000315 ORTHO05D008220 1.2e-36 156.4 97 75.3
Medtr2g100250 Medicago truncatula HOM05D000315 ORTHO05D008220 1.6e-36 156.0 90 78.9
arahy.Tifrunner.gnm1.ann1.SE7ST2 Arachis hypogaea HOM05D000315 ORTHO05D008220 2.0e-36 155.6 97 76.3
VMungo0331G0135 Vigna mungo HOM05D000315 ORTHO05D008220 1.3e-35 152.9 99 72.7
Lj3g0024426 Lotus japonicus HOM05D000315 ORTHO05D008220 2.2e-35 152.1 97 72.2
Lalb_Chr01g0013381 Lupinus albus HOM05D000315 ORTHO05D008220 2.2e-35 152.1 95 74.7
arahy.Tifrunner.gnm1.ann1.PTFL6P Arachis hypogaea HOM05D000315 ORTHO05D008220 5.0e-35 151.0 97 74.2
Gohir.A02G115700 Gossypium hirsutum HOM05D000315 ORTHO05D008220 1.1e-34 149.8 97 70.1
Glyma.07G010900 Glycine max HOM05D000315 ORTHO05D008220 3.2e-34 148.3 106 69.8
TPR.G6607 Trifolium pratense HOM05D000315 ORTHO05D008220 7.2e-34 147.1 103 70.9
COL.COLO4_30647 Corchorus olitorius HOM05D000315 ORTHO05D008220 9.4e-34 146.7 97 69.1
Atru.chr1.3675 Acer truncatum HOM05D000315 ORTHO05D008220 1.2e-33 146.4 95 70.5
Gorai.003G059700 Gossypium raimondii HOM05D000315 ORTHO05D008220 2.7e-33 145.2 97 67.0
MD09G1194700 Malus domestica HOM05D000315 ORTHO05D008220 2.7e-33 145.2 97 71.1
Medtr8g016160 Medicago truncatula HOM05D000315 ORTHO05D008220 4.7e-33 144.4 97 67.0
Thecc.06G109800 Theobroma cacao HOM05D000315 ORTHO05D008220 6.1e-33 144.1 95 71.6
Ciclev10024940m.g Citrus clementina HOM05D000315 ORTHO05D008220 4.0e-32 141.4 96 68.8
Manes.11G027600 Manihot esculenta HOM05D000315 ORTHO05D008220 4.0e-32 141.4 95 66.3
TWI31G0697 Tripterygium wilfordii HOM05D000315 ORTHO05D008220 4.0e-32 141.4 97 63.9
MD17G1175200 Malus domestica HOM05D000315 ORTHO05D008220 5.2e-32 141.0 96 68.8
RcHm_v2.0_Chr2g0142831 Rosa chinensis HOM05D000315 ORTHO05D008220 6.8e-32 140.6 96 68.8
FvH4_6g33140 Fragaria vesca HOM05D000315 ORTHO05D008220 1.2e-31 139.8 96 67.7
FAN14G2329 Fragaria x ananassa HOM05D000315 ORTHO05D008220 1.2e-31 139.8 96 67.7
FAN05G2112 Fragaria x ananassa HOM05D000315 ORTHO05D008220 1.5e-31 139.4 96 67.7
FAN02G3187 Fragaria x ananassa HOM05D000315 ORTHO05D008220 2.6e-31 138.7 96 66.7
Carub.0001s4368 Capsella rubella HOM05D000315 ORTHO05D008220 7.5e-31 137.1 96 63.5
Duzib235G1423 Durio zibethinus HOM05D000315 ORTHO05D008220 7.5e-31 137.1 97 62.9
Actinidia09024 Actinidia chinensis HOM05D000315 ORTHO05D008220 9.8e-31 136.7 97 60.8
A06p00360 Brassica napus HOM05D000315 ORTHO05D008220 9.8e-31 136.7 96 61.5
BraA06t23251Z Brassica rapa HOM05D000315 ORTHO05D008220 9.8e-31 136.7 96 61.5
BolC6t36088H Brassica oleracea HOM05D000315 ORTHO05D008220 1.3e-30 136.3 96 62.5
GSVIVG01016876001 Vitis vinifera HOM05D000315 ORTHO05D008220 1.3e-30 136.3 96 68.8
CANSAT56G3706 Cannabis sativa HOM05D000315 ORTHO05D008220 3.7e-30 134.8 95 67.4
Hma1.2p1_0388F.1_g142240 Hydrangea macrophylla HOM05D000315 ORTHO05D008220 3.7e-30 134.8 98 63.3
Prupe.3G051200 Prunus persica HOM05D000315 ORTHO05D008220 3.7e-30 134.8 96 66.7
C06p10140 Brassica napus HOM05D000315 ORTHO05D008220 4.8e-30 134.4 96 61.5
AT1G55180 Arabidopsis thaliana HOM05D000315 ORTHO05D008220 6.3e-30 134.0 96 63.5
Rhsim12G0205200 Rhododendron simsii HOM05D000315 ORTHO05D008220 8.3e-30 133.7 97 63.9
FAN09G2377 Fragaria x ananassa HOM05D000315 ORTHO05D008220 1.8e-29 132.5 96 65.6
Dinv30389 Davidia involucrata HOM05D000315 ORTHO05D008220 2.4e-29 132.1 97 60.8
AL1G63220 Arabidopsis lyrata HOM05D000315 ORTHO05D008220 3.1e-29 131.7 96 62.5
Sp1g40860 Schrenkiella parvula HOM05D000315 ORTHO05D008220 4.1e-29 131.3 96 61.5
CARHR044800 Cardamine hirsuta HOM05D000315 ORTHO05D008220 5.4e-29 131.0 96 62.5
Thhalv10011259m.g Eutrema salsugineum HOM05D000315 ORTHO05D008220 9.1e-29 130.2 96 61.5
Peaxi162Scf00038g01442 Petunia axillaris HOM05D000315 ORTHO05D008220 9.1e-29 130.2 95 65.3
Phvul.010G139800 Phaseolus vulgaris HOM05D000315 ORTHO05D008220 9.1e-29 130.2 104 64.4
CiPaw.01G226000 Carya illinoinensis HOM05D000315 ORTHO05D008220 1.2e-28 129.8 93 61.3
Lj9C518T1 Lonicera japonica HOM05D000315 ORTHO05D008220 1.6e-28 129.4 97 60.8
Sabra03G0025800 Salix brachista HOM05D000315 ORTHO05D008220 3.5e-28 128.3 97 61.9
CSS0038521 Camellia sinensis var. sinensis HOM05D000315 ORTHO05D008220 4.5e-28 127.9 99 54.5
CAN.G1389.6 Capsicum annuum HOM05D000315 ORTHO05D008220 4.5e-28 127.9 97 62.9
PSO063G1178 Papaver somniferum HOM05D000315 ORTHO05D008220 7.7e-28 127.1 99 58.6
Aqoxy7G01235 Aquilegia oxysepala HOM05D000315 ORTHO05D008220 2.3e-27 125.6 97 57.7
Nitab4.5_0004364g0020 Nicotiana tabacum HOM05D000315 ORTHO05D008220 5.0e-27 124.4 97 59.8
Ah.08g216130 Amaranthus hybridus HOM05D000315 ORTHO05D008220 8.6e-27 123.6 88 60.2
PSO832G2989 Papaver somniferum HOM05D000315 ORTHO05D008220 8.6e-27 123.6 95 60.0
vmacro16991 Vaccinium macrocarpon HOM05D000315 ORTHO05D008220 1.1e-26 123.2 112 54.5
AUR62009812 Chenopodium quinoa HOM05D000315 ORTHO05D008220 1.9e-26 122.5 90 57.8
AUR62038124 Chenopodium quinoa HOM05D000315 ORTHO05D008220 1.9e-26 122.5 90 57.8
Lsat_1_v5_gn_5_133581 Lactuca sativa HOM05D000315 ORTHO05D008220 1.9e-26 122.5 97 58.8
QL05p014797 Quercus lobata HOM05D000315 ORTHO05D008220 1.9e-26 122.5 96 61.5
arahy.Tifrunner.gnm1.ann1.63QAK2 Arachis hypogaea HOM05D000315 ORTHO05D008220 2.5e-26 122.1 104 58.7
Cfa003596 Carpinus fangiana HOM05D000315 ORTHO05D008220 5.5e-26 120.9 88 60.2
Eucgr.J02872 Eucalyptus grandis HOM05D000315 ORTHO05D008220 5.5e-26 120.9 95 56.8
Oeu026744.1 Olea europaea HOM05D000315 ORTHO05D008220 5.5e-26 120.9 97 58.8
CsaV3_3G043940 Cucumis sativus L. HOM05D000315 ORTHO05D008220 7.2e-26 120.6 98 55.1
Haze_15938 Corylus avellana HOM05D000315 ORTHO05D008220 1.6e-25 119.4 95 58.9
ClCG07G013680 Citrullus lanatus HOM05D000315 ORTHO05D008220 2.1e-25 119.0 98 54.1
ECA234G0845 Erigeron canadensis HOM05D000315 ORTHO05D008220 2.1e-25 119.0 90 56.7
Sed0019042 Sechium edule HOM05D000315 ORTHO05D008220 2.1e-25 119.0 98 57.1
arahy.Tifrunner.gnm1.ann1.1L37A5 Arachis hypogaea HOM05D000315 ORTHO05D008220 4.7e-25 117.9 104 54.8
Cc04_g02060 Coffea canephora HOM05D000315 ORTHO05D008220 1.8e-24 115.9 97 59.8
Aa31LG10G980 Aethionema arabicum HOM05D000315 ORTHO05D008220 3.0e-24 115.2 98 55.1
MELO3C013048.2 Cucumis melo HOM05D000315 ORTHO05D008220 1.2e-23 113.2 98 52.0
Migut.I01015 Erythranthe guttata HOM05D000315 ORTHO05D008220 5.7e-23 110.9 98 55.1
Nn8g38893 Nelumbo nucifera HOM05D000315 ORTHO05D008220 7.5e-23 110.5 98 55.1
TPR.G7913 Trifolium pratense HOM05D000315 ORTHO05D008220 7.5e-23 110.5 69 71.0
THA.LOC104815649 Tarenaya hassleriana HOM05D000315 ORTHO05D008220 4.9e-22 107.8 143 41.3
SalBow6G4502 Salvia bowleyana HOM05D000315 ORTHO05D008220 1.1e-21 106.7 97 51.5
Sc10g0007760 Simmondsia chinensis HOM05D000315 ORTHO05D008220 1.2e-20 103.2 100 55.0
Glyma.08G194100 Glycine max HOM05D000315 ORTHO05D008220 3.5e-20 101.7 68 67.6
SGA_v2.0_scaffold71G23766 Striga asiatica HOM05D000315 ORTHO05D008220 3.3e-18 95.1 97 51.5
Potri.003G037700 Populus trichocarpa HOM05D000315 ORTHO05D008220 1.2e-17 93.2 63 66.7
EL10Ac7g15776 Beta vulgaris HOM05D000315 ORTHO05D008220 2.0e-15 85.9 67 56.7
Ca_23309_v3 Cicer arietinum L. HOM05D000315 ORTHO05D008220 2.0e-15 85.9 49 77.6
ATR0686G156 Amborella trichopoda HOM05D000315 ORTHO05D008220 4.0e-08 61.6 67 43.3


User provided reference genes

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