Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 2.1e-216 755.4 374 100.0
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 5.6e-84 315.5 354 53.7
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 5.6e-84 315.5 359 49.9
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 1.3e-77 294.3 348 48.9
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 9.9e-73 278.1 336 49.1
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 6.4e-72 275.4 336 48.2
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 1.1e-68 264.6 323 49.5
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 1.6e-67 260.8 370 43.8
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 1.4e-66 257.7 347 45.8
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 5.3e-66 255.8 347 45.5
Phvul.005G153000 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 1.2e-46 191.4 330 42.4
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 1.3e-43 181.4 354 33.9
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 1.6e-38 164.5 368 33.2
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 2.7e-38 163.7 368 32.6
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 1.6e-33 147.9 368 32.9
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 3.2e-31 140.2 338 31.1
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 3.2e-31 140.2 285 35.1
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 8.0e-30 135.6 354 31.9
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 2.3e-29 134.0 315 32.1
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 6.8e-29 132.5 376 30.9
TPR.G34237 Trifolium pratense HOM05D008235 ORTHO05D009358 1.5e-28 131.3 331 34.1
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 1.8e-26 124.4 264 36.7
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 5.3e-26 122.9 243 31.7
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 7.0e-26 122.5 353 29.2
Glyma.15G030050 Glycine max HOM05D008235 ORTHO05D009358 9.1e-26 122.1 67 88.1
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 5.9e-25 119.4 333 30.0
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.9e-23 114.4 304 30.3
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 2.5e-23 114.0 237 30.8
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 1.6e-22 111.3 238 30.3
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 1.6e-22 111.3 162 44.4
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 2.1e-22 110.9 317 31.2
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 4.7e-22 109.8 332 31.6
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 1.0e-21 108.6 327 31.5
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 1.4e-21 108.2 323 31.6
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 4.0e-21 106.7 335 28.1
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 4.0e-21 106.7 301 32.2
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 6.8e-21 105.9 261 30.7
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 1.2e-20 105.1 333 27.9
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 2.0e-20 104.4 321 29.6
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 2.0e-20 104.4 256 29.7
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 3.4e-20 103.6 337 28.5
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 4.4e-20 103.2 298 32.2
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 5.7e-20 102.8 272 27.6
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 3.7e-19 100.1 262 29.4
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 4.8e-19 99.8 262 29.4
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 4.8e-19 99.8 314 29.6
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 3.1e-18 97.1 319 30.7
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 9.1e-18 95.5 321 26.8
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 7.7e-17 92.4 321 26.8
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 2.9e-16 90.5 297 27.9
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 3.3e-15 87.0 265 32.1
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 1.2e-14 85.1 351 27.4
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 2.8e-14 84.0 289 27.3
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 2.8e-14 84.0 289 27.3
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 8.9e-13 79.0 278 29.9
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 1.7e-11 74.7 293 30.0
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 1.1e-10 72.0 303 28.4
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 1.4e-10 71.6 318 28.3
Peaxi162Scf01052g00325 Petunia axillaris HOM05D014650 ORTHO05D009358 3.2e-10 70.5 109 40.4
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 1.6e-09 68.2 300 27.0
Nitab4.5_0011467g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 2.7e-09 67.4 114 40.4
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 7.8e-09 65.9 114 33.3
CAN.G112.20 Capsicum annuum HOM05D014650 ORTHO05D022197 1.3e-08 65.1 110 37.3
Solyc05g050740.3 Solanum lycopersicum HOM05D014650 ORTHO05D009358 1.7e-08 64.7 111 36.9
Nitab4.5_0002598g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 1.5e-07 61.6 92 42.4
Sopen05g029150 Solanum pennellii HOM05D014650 ORTHO05D022197 3.3e-07 60.5 111 36.0
Oeu053824.1 Olea europaea HOM05D008235 ORTHO05D009358 7.3e-07 59.3 279 22.6
Cc03_g12910 Coffea canephora HOM05D008235 ORTHO05D009358 1.6e-06 58.2 83 43.4
ATR0824G133 Amborella trichopoda HOM05D008235 ORTHO05D009358 8.0e-06 55.8 63 39.7


User provided reference genes

Program Settings