Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 9.7e-114 414.8 534 100.0
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 2.3e-62 244.2 192 71.9
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 2.4e-40 171.0 194 58.8
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 8.7e-38 162.5 201 54.7
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 1.2e-23 115.5 211 41.7
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 1.2e-23 115.5 187 49.7
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 5.1e-22 110.2 209 42.6
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 1.3e-20 105.5 182 45.6
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 2.2e-20 104.8 199 43.2
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 6.9e-19 99.8 201 41.3
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 9.0e-19 99.4 177 43.5
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 2.0e-18 98.2 140 48.6
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 4.5e-18 97.1 189 42.9
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 7.9e-15 86.3 144 46.5
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 3.0e-14 84.3 146 43.2
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 6.5e-09 66.6 79 50.6
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 3.2e-08 64.3 36 75.0
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 9.4e-08 62.8 72 44.4
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 4.7e-07 60.5 62 46.8
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 6.1e-07 60.1 36 72.2
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 1.0e-06 59.3 34 67.6
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 2.3e-06 58.2 50 52.0
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 5.1e-06 57.0 62 46.8


User provided reference genes

Program Settings