Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 6.4e-44 180.3 85 100.0
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 7.1e-43 176.8 85 97.6
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 4.6e-42 174.1 85 95.3
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 1.3e-41 172.6 85 95.3
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 1.3e-41 172.6 85 92.9
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 9.6e-40 166.4 79 97.5
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 2.1e-39 165.2 79 96.2
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 2.8e-39 164.9 86 90.7
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 2.8e-39 164.9 85 88.2
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 4.8e-39 164.1 85 88.2
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 4.0e-38 161.0 81 88.9
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 5.3e-38 160.6 84 88.1
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 5.3e-38 160.6 85 87.1
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 1.5e-37 159.1 94 80.9
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 1.5e-37 159.1 84 86.9
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 2.0e-37 158.7 84 86.9
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 2.0e-37 158.7 84 86.9
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 2.6e-37 158.3 85 83.5
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 4.5e-37 157.5 84 86.9
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 4.5e-37 157.5 84 83.3
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 9.9e-37 156.4 94 78.7
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 2.2e-36 155.2 83 83.1
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 8.4e-36 153.3 85 81.2
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 1.1e-35 152.9 84 82.1
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 1.9e-35 152.1 79 86.1
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 2.4e-35 151.8 85 81.2
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 3.2e-35 151.4 85 82.4
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.2e-34 149.4 85 77.6
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.0e-33 146.4 85 76.5
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.3e-33 146.0 84 76.2
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 1.3e-33 146.0 80 80.0
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 1.3e-33 146.0 80 80.0
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 1.8e-33 145.6 85 75.3
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 3.0e-33 144.8 80 80.0
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 3.0e-33 144.8 80 80.0
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 3.9e-33 144.4 86 82.6
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 3.9e-33 144.4 86 82.6
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 3.9e-33 144.4 86 82.6
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 3.9e-33 144.4 79 79.7
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 5.1e-33 144.1 84 81.0
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 5.1e-33 144.1 76 81.6
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 1.1e-32 142.9 85 74.1
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 1.5e-32 142.5 85 74.1
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.5e-32 142.5 86 75.6
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.5e-32 142.5 86 75.6
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.9e-32 142.1 80 76.2
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 1.9e-32 142.1 85 78.8
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.5e-32 141.7 86 75.6
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 2.5e-32 141.7 86 75.6
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 4.3e-32 141.0 86 74.4
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 4.3e-32 141.0 84 77.4
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 4.3e-32 141.0 76 81.6
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 5.6e-32 140.6 86 74.4
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 7.4e-32 140.2 68 94.1
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 7.4e-32 140.2 84 72.6
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 7.4e-32 140.2 84 72.6
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 7.4e-32 140.2 86 79.1
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 9.6e-32 139.8 77 77.9
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 9.6e-32 139.8 76 80.3
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 9.6e-32 139.8 76 80.3
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 9.6e-32 139.8 80 75.0
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 1.6e-31 139.0 68 89.7
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 1.6e-31 139.0 84 73.8
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 2.1e-31 138.7 84 78.6
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 2.1e-31 138.7 86 76.7
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 2.1e-31 138.7 77 77.9
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 2.1e-31 138.7 79 79.7
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 2.1e-31 138.7 86 75.6
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 2.8e-31 138.3 77 79.2
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 6.2e-31 137.1 85 75.3
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 6.2e-31 137.1 85 72.9
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 6.2e-31 137.1 85 72.9
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 1.4e-30 136.0 85 74.1
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 1.4e-30 136.0 85 75.3
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 1.8e-30 135.6 73 82.2
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 1.8e-30 135.6 84 66.7
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 3.1e-30 134.8 84 75.0
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 3.1e-30 134.8 84 70.2
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 3.1e-30 134.8 79 73.4
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 4.0e-30 134.4 82 70.7
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 4.0e-30 134.4 84 75.0
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 9.0e-30 133.3 86 72.1
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 1.2e-29 132.9 82 70.7
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 1.2e-29 132.9 84 73.8
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 1.5e-29 132.5 79 72.2
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 1.5e-29 132.5 85 71.8
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 2.0e-29 132.1 79 72.2
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 2.6e-29 131.7 77 72.7
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 4.5e-29 131.0 85 70.6
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 5.8e-29 130.6 85 72.9
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 7.6e-29 130.2 85 71.8
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 7.6e-29 130.2 85 70.6
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 7.6e-29 130.2 85 70.6
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 9.9e-29 129.8 77 71.4
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 1.3e-28 129.4 79 70.9
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 1.3e-28 129.4 101 64.4
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 1.7e-28 129.0 84 72.6
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 2.2e-28 128.6 63 87.3
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 2.9e-28 128.3 91 63.7
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 2.9e-28 128.3 76 73.7
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 3.8e-28 127.9 80 66.2
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 4.9e-28 127.5 90 68.9
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.1e-27 126.3 85 64.7
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 1.4e-27 125.9 74 77.0
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 1.9e-27 125.6 94 61.7
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 2.4e-27 125.2 73 69.9
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 3.2e-27 124.8 67 82.1
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 7.1e-27 123.6 86 67.4
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 7.1e-27 123.6 85 69.4
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 7.1e-27 123.6 85 72.9
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 1.2e-26 122.9 70 80.0
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 1.2e-26 122.9 70 80.0
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 1.2e-26 122.9 84 70.2
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.2e-26 122.9 85 62.4
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 2.7e-26 121.7 76 68.4
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 3.5e-26 121.3 65 78.5
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 4.6e-26 120.9 68 76.5
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 4.6e-26 120.9 67 80.6
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 7.9e-26 120.2 77 70.1
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 7.9e-26 120.2 86 65.1
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 1.3e-25 119.4 86 64.0
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 1.8e-25 119.0 115 53.0
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 1.8e-25 119.0 85 63.5
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 2.3e-25 118.6 86 64.0
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 5.6e-24 114.0 72 70.8
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 7.4e-24 113.6 83 65.1
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 7.4e-24 113.6 54 90.7
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 9.6e-24 113.2 67 77.6
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 1.6e-23 112.5 87 60.9
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.6e-23 112.5 86 66.3
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 3.7e-23 111.3 84 63.1
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 3.7e-23 111.3 53 88.7
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 6.2e-23 110.5 52 90.4
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 8.2e-23 110.2 58 82.8
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 4.0e-22 107.8 98 56.1
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 4.0e-22 107.8 66 75.8
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 6.9e-22 107.1 54 87.0
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 6.9e-22 107.1 85 64.7
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 3.4e-21 104.8 69 65.2
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 7.6e-21 103.6 56 82.1
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 7.6e-21 103.6 72 55.6
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 1.0e-20 103.2 71 56.3
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 1.4e-19 99.4 52 82.7
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 2.5e-19 98.6 77 55.8
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 9.3e-19 96.7 54 72.2
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 1.2e-18 96.3 100 52.0
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.7e-18 95.1 52 82.7
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.3e-17 92.8 68 66.2
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 2.3e-17 92.0 97 48.5
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 1.9e-16 89.0 72 61.1
TPR.G13621 Trifolium pratense HOM05D004551 ORTHO05D005262 5.7e-16 87.4 40 95.0
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 1.6e-15 85.9 62 56.5
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 4.5e-13 77.8 51 70.6
SHI22087 Sapria himalayana HOM05D004551 ORTHO05D005262 4.5e-13 77.8 59 55.9
MD02G1278800 Malus domestica HOM05D004551 ORTHO05D005262 3.8e-12 74.7 59 62.7
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 1.2e-10 69.7 46 63.0
Haze_27300 Corylus avellana HOM05D004551 ORTHO05D005262 5.1e-09 64.3 62 45.2
PRCOL_00001542 Prasinoderma coloniale HOM05D002457 ORTHO05D005262 5.1e-09 64.3 63 46.0
MELO3C035440.2 Cucumis melo HOM05D004551 ORTHO05D005262 9.7e-08 60.1 114 38.6


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