Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G338900 Glycine max HOM05D008943 ORTHO05D010477 2.1e-67 258.8 127 100.0
Glyma.15G035400 Glycine max HOM05D008943 ORTHO05D010477 7.6e-49 197.2 128 79.7
Lj3g0000367 Lotus japonicus HOM05D008943 ORTHO05D010477 9.6e-36 153.7 129 62.8
TPR.G6894 Trifolium pratense HOM05D008943 ORTHO05D010477 6.2e-35 151.0 130 64.6
Lj3g0017475 Lotus japonicus HOM05D008943 ORTHO05D010477 9.0e-34 147.1 130 60.0
Phvul.L008143 Phaseolus vulgaris HOM05D008943 ORTHO05D010477 1.3e-32 143.3 125 61.6
VMungo1080G1120 Vigna mungo HOM05D008943 ORTHO05D010477 1.1e-31 140.2 129 58.9
Medtr2g097730 Medicago truncatula HOM05D008943 ORTHO05D010477 1.0e-29 133.7 126 59.5
Lalb_Chr14g0372021 Lupinus albus HOM05D008943 ORTHO05D010477 2.5e-28 129.0 127 59.8
Haze_24168 Corylus avellana HOM05D008943 ORTHO05D010477 6.5e-16 87.8 111 45.0
Haze_24173 Corylus avellana HOM05D008943 ORTHO05D010477 6.5e-16 87.8 111 45.0
CiPaw.14G065200 Carya illinoinensis HOM05D008943 ORTHO05D010477 8.5e-16 87.4 129 42.6
QL01p029253 Quercus lobata HOM05D008943 ORTHO05D010477 2.5e-15 85.9 127 40.2
CiPaw.13G089400 Carya illinoinensis HOM05D008943 ORTHO05D010477 4.2e-15 85.1 128 43.0
TPR.G23615 Trifolium pratense HOM05D029454 ORTHO05D010477 1.4e-13 80.1 138 39.9
Cfa011556 Carpinus fangiana HOM05D008943 ORTHO05D010477 1.8e-13 79.7 113 41.6
FvH4_3g36931 Fragaria vesca HOM05D008943 ORTHO05D010477 2.3e-13 79.3 108 40.7
Prupe.6G070600 Prunus persica HOM05D008943 ORTHO05D010477 3.3e-12 75.5 119 43.7
RcHm_v2.0_Chr5g0066341 Rosa chinensis HOM05D008943 ORTHO05D010477 4.3e-12 75.1 112 37.5
Duzib168G0546 Durio zibethinus HOM05D014101 ORTHO05D010477 9.7e-12 73.9 139 39.6
TWI79G1516 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 1.1e-10 70.5 120 40.8
Medtr4g064870 Medicago truncatula HOM05D029454 ORTHO05D010477 3.1e-10 68.9 84 48.8
TPR.G238 Trifolium pratense HOM05D029454 ORTHO05D010477 5.3e-10 68.2 138 35.5
Nn2g11207 Nelumbo nucifera HOM05D008943 ORTHO05D010477 1.5e-09 66.6 110 40.0
CANSAT54G0610 Cannabis sativa HOM05D008943 ORTHO05D010477 2.6e-09 65.9 140 35.0
TWI31G0177 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 1.7e-08 63.2 120 39.2
COL.COLO4_18576 Corchorus olitorius HOM05D014101 ORTHO05D010477 5.0e-08 61.6 112 42.0
PGSC0003DMG400030330 Solanum tuberosum HOM05D018880 ORTHO05D010477 6.5e-08 61.2 124 38.7
Manes.01G169500 Manihot esculenta HOM05D008943 ORTHO05D010477 7.2e-07 57.8 130 35.4
MELO3C025891.2 Cucumis melo HOM05D008943 ORTHO05D010477 9.4e-07 57.4 108 40.7
Os03g0270800 Oryza sativa ssp. japonica HOM05D008943 ORTHO05D010477 9.4e-07 57.4 136 30.9
Potri.001G244200 Populus trichocarpa HOM05D008943 ORTHO05D010477 9.4e-07 57.4 114 36.0
ClCG02G019900 Citrullus lanatus HOM05D008943 ORTHO05D010477 1.2e-06 57.0 107 38.3
CsaV3_7G010000 Cucumis sativus L. HOM05D008943 ORTHO05D010477 1.6e-06 56.6 111 42.3
Gohir.D07G104550 Gossypium hirsutum HOM05D014101 ORTHO05D010477 2.1e-06 56.2 133 33.1
Sabra09G0025900 Salix brachista HOM05D008943 ORTHO05D010477 2.1e-06 56.2 128 35.2
Gorai.001G112400 Gossypium raimondii HOM05D014101 ORTHO05D010477 4.7e-06 55.1 133 33.1
Potri.009G036600 Populus trichocarpa HOM05D008943 ORTHO05D010477 6.1e-06 54.7 123 36.6
Gohir.A07G100350 Gossypium hirsutum HOM05D014101 ORTHO05D010477 7.9e-06 54.3 132 33.3


User provided reference genes

Program Settings