Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 1.2e-188 663.3 394 100.0
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 1.1e-133 480.7 402 79.9
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 2.3e-72 276.9 439 52.6
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 2.9e-70 270.0 436 46.8
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 7.3e-66 255.4 423 48.0
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.4e-64 251.1 444 45.7
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 6.8e-56 222.2 418 45.5
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.7e-54 217.6 405 43.5
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 8.9e-48 195.3 196 59.7
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 1.5e-47 194.5 391 42.5
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 9.9e-47 191.8 410 41.2
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 2.1e-41 174.1 407 39.6
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 2.0e-39 167.5 368 37.5
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 4.2e-37 159.8 392 37.0
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 4.2e-37 159.8 189 55.0
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 7.1e-37 159.1 433 35.1
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 1.6e-36 157.9 439 35.8
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 2.7e-36 157.1 396 37.6
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 3.5e-36 156.8 399 35.6
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 6.0e-36 156.0 438 35.2
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 7.8e-36 155.6 416 36.1
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 7.8e-36 155.6 445 36.2
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 1.1e-34 151.8 405 36.3
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 1.9e-34 151.0 417 37.6
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 1.9e-34 151.0 404 35.6
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 5.6e-34 149.4 358 36.0
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 4.8e-33 146.4 405 34.6
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 6.2e-33 146.0 358 36.6
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 8.1e-33 145.6 439 34.9
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 3.1e-32 143.7 402 35.1
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.5e-31 141.4 482 32.0
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 1.5e-31 141.4 407 36.4
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 2.0e-31 141.0 388 35.1
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 7.6e-31 139.0 356 36.5
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 9.9e-31 138.7 433 35.1
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.3e-30 138.3 363 36.1
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 2.2e-30 137.5 400 36.0
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.8e-30 136.7 396 34.6
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 3.8e-30 136.7 223 45.3
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 8.4e-30 135.6 377 36.1
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 1.1e-29 135.2 371 32.9
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.9e-29 134.4 167 52.7
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 3.2e-29 133.7 412 35.7
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 4.2e-29 133.3 396 34.3
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 4.2e-29 133.3 394 32.5
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 7.1e-29 132.5 123 60.2
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 2.1e-28 131.0 330 34.8
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 4.6e-28 129.8 260 40.4
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 3.9e-27 126.7 338 37.9
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 6.7e-27 125.9 270 39.3
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 6.7e-27 125.9 426 32.6
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 9.6e-26 122.1 362 33.7
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 1.3e-25 121.7 341 32.8
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 3.1e-24 117.1 418 32.8
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 4.0e-24 116.7 339 31.3
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 2.6e-23 114.0 394 32.7
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 8.4e-22 109.0 231 41.1
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 8.4e-22 109.0 195 42.1
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 1.4e-21 108.2 460 29.6
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 2.5e-21 107.5 288 34.7
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 3.2e-21 107.1 205 40.5
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 2.1e-20 104.4 330 33.0
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 3.5e-20 103.6 423 30.7
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 6.0e-20 102.8 93 62.4
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 7.9e-20 102.4 417 30.5
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 1.0e-19 102.1 137 49.6
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 1.0e-19 102.1 137 49.6
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 1.8e-19 101.3 340 32.9
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 2.5e-18 97.4 245 34.7
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 9.6e-18 95.5 291 29.2
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 9.6e-18 95.5 411 31.1
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.3e-17 95.1 455 29.0
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 2.1e-17 94.4 471 28.2
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 8.2e-17 92.4 107 55.1
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 8.2e-17 92.4 173 41.0
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.4e-16 90.9 268 35.8
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 2.4e-16 90.9 221 37.1
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 3.4e-15 87.0 400 30.0
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 5.8e-15 86.3 273 33.7
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 7.6e-15 85.9 366 29.5
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 1.0e-14 85.5 249 35.3
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 1.3e-14 85.1 247 33.6
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.7e-14 84.7 298 32.6
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.1e-13 82.0 350 29.4
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 1.9e-13 81.3 289 31.1
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 2.5e-13 80.9 230 33.9
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 3.2e-13 80.5 265 29.1
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 7.1e-13 79.3 190 35.3
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 7.1e-13 79.3 307 30.9
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 7.1e-13 79.3 363 28.4
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 1.2e-12 78.6 256 33.2
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 1.2e-12 78.6 256 33.2
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 3.5e-12 77.0 266 33.1
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 3.5e-12 77.0 302 31.1
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 1.8e-11 74.7 141 40.4
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 3.0e-11 73.9 399 29.1
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 5.1e-11 73.2 336 29.2
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 6.7e-11 72.8 271 32.1
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 6.7e-11 72.8 252 34.1
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 1.1e-10 72.0 301 32.2
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 1.9e-10 71.2 422 27.0
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 4.3e-10 70.1 399 28.8
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 4.3e-10 70.1 416 26.9
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 4.3e-10 70.1 69 52.2
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 5.7e-10 69.7 403 27.3
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 9.7e-10 68.9 330 26.7
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.6e-09 68.2 221 33.9
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 2.2e-09 67.8 173 34.1
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 3.7e-09 67.0 403 26.8
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 3.7e-09 67.0 109 44.0
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 7.7e-07 59.3 197 32.5
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.0e-06 58.9 339 28.0
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.7e-06 58.2 397 26.7
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 5.0e-06 56.6 223 31.4


User provided reference genes

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