Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 2297.3 1214 100.0
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 2002.3 1175 88.1
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 0.0e+00 1952.2 1177 85.8
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1833.2 1168 81.7
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 0.0e+00 1773.1 1171 79.5
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1758.4 1171 78.4
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 0.0e+00 1750.3 1158 79.8
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1743.0 1174 77.2
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1738.0 1174 76.8
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 0.0e+00 1734.5 1169 78.0
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 0.0e+00 1682.2 1193 75.4
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1393.3 1194 63.7
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1378.2 1179 63.9
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1375.1 1193 63.0
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1371.3 1182 62.1
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1366.7 1186 63.1
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1363.6 1181 63.1
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1354.0 1180 61.9
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1350.1 1177 62.4
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1346.3 1176 62.3
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1342.8 1176 62.2
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1342.8 1195 61.1
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1341.6 1195 61.2
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1334.7 1185 61.7
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1325.5 787 92.9
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1322.8 1166 62.1
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1316.6 1185 61.7
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1313.9 1195 60.2
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1306.2 1181 60.9
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1305.8 1179 61.4
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1288.1 1190 59.8
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1284.2 1178 59.7
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1283.5 1172 60.9
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1283.1 1246 58.3
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1280.4 1233 58.5
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 0.0e+00 1276.5 1189 59.1
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 0.0e+00 1275.8 1189 59.0
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1267.7 1201 59.2
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 0.0e+00 1264.6 1188 58.3
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 0.0e+00 1228.8 1110 60.4
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 0.0e+00 1222.6 1246 55.9
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1218.4 1173 58.5
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 1203.0 1181 57.3
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1199.5 1175 57.1
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 0.0e+00 1196.4 1180 57.0
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 0.0e+00 1164.4 1184 56.1
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 0.0e+00 1162.9 1187 56.0
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 0.0e+00 1162.1 1084 60.0
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 0.0e+00 1159.1 1186 55.6
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 0.0e+00 1157.5 1177 56.0
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 0.0e+00 1154.0 1191 55.5
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 0.0e+00 1147.9 1186 55.1
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1145.6 1207 53.5
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 0.0e+00 1141.7 1198 54.7
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 0.0e+00 1135.6 1237 53.4
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 0.0e+00 1132.1 1176 54.9
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 0.0e+00 1128.2 1190 53.5
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 0.0e+00 1119.8 1195 53.8
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 1098.2 1171 53.4
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 0.0e+00 1095.1 1189 52.5
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 1086.6 1179 52.7
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 0.0e+00 1081.2 1188 52.9
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 1.4e-309 1066.6 1023 58.3
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 1.6e-305 1053.1 1205 50.6
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.6e-305 1053.1 1189 51.1
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 6.1e-305 1051.2 1172 51.3
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 7.2e-298 1027.7 1180 50.7
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 2.7e-297 1025.8 1185 50.8
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 5.2e-296 1021.5 1238 48.2
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 5.3e-293 1011.5 1196 52.3
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 4.2e-290 1001.9 1195 49.8
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 3.7e-286 988.8 1187 49.3
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 3.7e-286 988.8 1196 49.2
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 7.0e-285 984.6 1173 49.0
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 7.2e-282 974.5 1071 53.9
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 5.2e-280 968.4 1196 48.7
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 3.8e-275 952.2 1122 49.4
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 3.2e-269 932.6 1122 49.4
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.2e-268 930.6 1180 45.6
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 6.2e-265 918.3 775 65.5
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 4.4e-263 912.1 1036 51.2
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 6.6e-259 898.3 1247 45.5
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 3.6e-241 839.3 1187 43.4
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 2.1e-236 823.5 1179 43.5
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 7.9e-228 795.0 744 59.9
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 6.9e-224 781.9 1059 45.1
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 7.1e-213 745.3 399 93.7
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 5.9e-207 725.7 1169 40.6
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 5.5e-205 719.2 985 44.4
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 2.2e-169 600.9 1233 36.3
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 2.0e-162 577.8 1178 35.1
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 2.2e-153 547.7 618 48.9
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 2.0e-143 514.6 1124 35.6
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 2.1e-140 504.6 1234 33.1
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.5e-125 454.5 627 46.6
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 5.8e-106 390.2 385 54.3
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 4.2e-96 357.5 445 51.9
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.3e-85 321.2 520 39.4
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 7.4e-77 293.5 270 60.4
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 2.2e-65 255.4 1288 26.6
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 5.0e-65 254.2 263 56.3
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 5.2e-62 244.2 393 39.2
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 3.5e-42 178.3 211 49.8
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 3.9e-33 148.3 91 76.9
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 2.8e-31 142.1 119 57.1
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 1.4e-30 139.8 125 56.0
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.6e-29 135.6 86 72.1
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 1.7e-28 132.9 74 78.4
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 3.7e-28 131.7 114 57.0
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.2e-27 128.6 110 56.4
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 4.6e-26 124.8 107 56.1
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 1.1e-22 113.6 110 60.9
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.5e-21 109.8 83 61.4
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 3.6e-07 62.0 74 43.2
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 1.4e-06 60.1 145 29.0


User provided reference genes

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