Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 2.9e-54 214.9 106 100.0
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 7.5e-50 200.3 106 93.4
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 1.2e-44 183.0 106 88.7
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 1.7e-41 172.6 106 84.0
VMungo0507G0001 Vigna mungo HOM05D008514 ORTHO05D010490 4.1e-32 141.4 107 72.9
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 1.2e-31 139.8 106 67.9
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 1.0e-22 110.2 113 60.2
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 3.0e-22 108.6 109 59.6
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 6.6e-22 107.5 108 57.4
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 7.3e-21 104.0 106 50.0
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 8.1e-20 100.5 144 47.2
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 6.8e-19 97.4 108 53.7
Psat5g259960 Pisum sativum HOM05D008514 ORTHO05D010490 1.9e-16 89.4 108 51.9
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 4.1e-16 88.2 108 47.2
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 2.1e-15 85.9 104 48.1
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 1.0e-14 83.6 102 47.1
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 1.5e-13 79.7 106 44.3
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 5.6e-13 77.8 123 40.7
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 5.6e-13 77.8 106 46.2
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 7.3e-13 77.4 114 47.4
Medtr2g087180 Medicago truncatula HOM05D008514 ORTHO05D010490 1.2e-12 76.6 100 46.0
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.6e-12 76.3 109 42.2
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 2.1e-12 75.9 104 46.2
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 4.7e-12 74.7 106 44.3
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 4.0e-11 71.6 96 41.7
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 6.8e-11 70.9 106 39.6
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 2.0e-10 69.3 79 44.3
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 3.4e-10 68.6 117 40.2
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 7.6e-10 67.4 105 43.8
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 2.2e-09 65.9 102 42.2
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 2.9e-09 65.5 102 42.2
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 2.9e-09 65.5 102 42.2
Nitab4.5_0003419g0020 Nicotiana tabacum HOM05D008514 ORTHO05D010490 3.8e-09 65.1 89 40.4
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 6.4e-09 64.3 98 41.8
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.4e-08 63.2 107 36.4
Peaxi162Scf00429g00081 Petunia axillaris HOM05D008514 ORTHO05D010490 1.4e-08 63.2 84 42.9
Medtr4g051618 Medicago truncatula HOM05D008514 ORTHO05D010490 1.9e-08 62.8 107 40.2
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 1.2e-07 60.1 110 39.1
Migut.D02369 Erythranthe guttata HOM05D039154 ORTHO05D010490 1.6e-07 59.7 55 54.5
Manes.11G165600 Manihot esculenta HOM05D008514 ORTHO05D010490 1.6e-07 59.7 106 40.6
PGSC0003DMG400046267 Solanum tuberosum HOM05D008514 ORTHO05D010490 2.1e-07 59.3 96 38.5
TPR.G33036 Trifolium pratense HOM05D008514 ORTHO05D413081 2.7e-07 58.9 97 38.1
Solyc11g071380.1 Solanum lycopersicum HOM05D008514 ORTHO05D010490 3.5e-07 58.5 96 36.5
Sopen11g029060 Solanum pennellii HOM05D008514 ORTHO05D010490 3.5e-07 58.5 96 36.5
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 1.0e-06 57.0 78 39.7
Nitab4.5_0008285g0040 Nicotiana tabacum HOM05D008514 ORTHO05D010490 1.3e-06 56.6 37 62.2
FAN02G1308 Fragaria x ananassa HOM05D022265 ORTHO05D010490 2.3e-06 55.8 111 39.6
ClCG01G011530 Citrullus lanatus HOM05D029204 ORTHO05D010490 3.9e-06 55.1 42 59.5
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 6.6e-06 54.3 80 41.2


User provided reference genes

Program Settings