Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 5.0e-123 444.5 235 100.0
Glyma.U031322 Glycine max HOM05D010177 ORTHO05D003109 1.3e-83 313.5 240 76.2
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 1.2e-76 290.4 240 72.1
Phvul.005G106600 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 3.3e-66 255.8 239 65.7
Lalb_Chr14g0366711 Lupinus albus HOM05D010177 ORTHO05D003109 1.7e-41 173.7 263 49.0
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 2.2e-41 173.3 270 50.0
Ca_01527_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 6.1e-36 155.2 261 47.9
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 1.4e-35 154.1 321 42.4
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 3.7e-33 146.0 298 44.3
arahy.Tifrunner.gnm1.ann1.48X98F Arachis hypogaea HOM05D010177 ORTHO05D003109 8.3e-33 144.8 271 48.7
Medtr2g090150 Medicago truncatula HOM05D010177 ORTHO05D003109 5.9e-31 138.7 286 46.2
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 2.9e-30 136.3 314 41.7
Lj3g0005406 Lotus japonicus HOM05D010177 ORTHO05D003109 1.5e-29 134.0 280 46.4
Ca_20682_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 9.5e-29 131.3 297 40.7
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 3.0e-27 126.3 292 41.8
Psat5g270560 Pisum sativum HOM05D010177 ORTHO05D003109 3.0e-27 126.3 286 44.4
Glyma.U031310 Glycine max HOM05D010177 ORTHO05D003109 4.9e-25 119.0 292 40.4
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 5.4e-24 115.5 322 38.8
Phvul.011G112800 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 3.6e-20 102.8 303 37.3
VMungo1127G1338 Vigna mungo HOM05D010177 ORTHO05D003109 2.9e-17 93.2 310 35.2
TPR.G40438 Trifolium pratense HOM05D010177 ORTHO05D003109 1.1e-13 81.3 159 47.8
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 1.9e-13 80.5 327 35.2
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 3.3e-13 79.7 273 38.5
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 1.6e-12 77.4 313 35.1
Medtr4g046123 Medicago truncatula HOM05D010177 ORTHO05D003109 2.1e-12 77.0 354 31.1
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.4e-11 74.3 237 38.8
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.8e-11 73.9 269 35.3
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.8e-11 73.9 269 35.3
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 4.0e-11 72.8 276 36.6
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 8.9e-11 71.6 281 36.3
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 2.6e-10 70.1 283 33.6
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 2.6e-10 70.1 267 35.6
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 2.6e-10 70.1 267 35.6
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 4.4e-10 69.3 301 33.6
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 1.3e-09 67.8 274 36.5
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 4.9e-09 65.9 300 37.7
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 1.1e-08 64.7 281 34.5
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 1.4e-08 64.3 261 34.9
PGR042G0321 Punica granatum HOM05D004441 ORTHO05D003109 1.4e-08 64.3 317 34.4
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 2.4e-08 63.5 279 33.3
CiPaw.03G171700 Carya illinoinensis HOM05D004441 ORTHO05D003109 3.2e-08 63.2 267 35.2
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 5.4e-08 62.4 292 31.8
FAN05G0655 Fragaria x ananassa HOM05D010652 ORTHO05D003109 7.0e-08 62.0 274 34.7
FAN05G4761 Fragaria x ananassa HOM05D010652 ORTHO05D003109 7.0e-08 62.0 274 34.7
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 2.0e-07 60.5 296 33.1
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 2.7e-07 60.1 270 33.0
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 4.6e-07 59.3 302 31.5
TPR.G21670 Trifolium pratense HOM05D010177 ORTHO05D003109 4.6e-07 59.3 74 51.4
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 7.8e-07 58.5 272 33.8
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 7.8e-07 58.5 246 34.6
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.0e-06 58.2 311 32.2
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.0e-06 58.2 305 32.5
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 1.7e-06 57.4 287 32.1
Manes.12G087900 Manihot esculenta HOM05D010652 ORTHO05D003109 3.0e-06 56.6 292 32.2
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 3.0e-06 56.6 308 33.8
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 3.9e-06 56.2 272 32.7
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 5.0e-06 55.8 317 31.2
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 5.0e-06 55.8 307 30.6
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 5.0e-06 55.8 265 34.0
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 6.6e-06 55.5 283 32.9
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 8.6e-06 55.1 284 32.7
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 8.6e-06 55.1 282 33.3
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 8.6e-06 55.1 280 33.2


User provided reference genes

Program Settings