Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 2.1e-67 258.8 125 100.0
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 9.1e-39 163.7 140 65.0
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 3.3e-36 155.2 124 67.7
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 9.5e-36 153.7 163 55.8
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 2.3e-29 132.5 123 62.6
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 8.6e-29 130.6 133 59.4
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 7.3e-28 127.5 128 60.2
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.2e-27 126.7 127 59.8
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 3.6e-27 125.2 115 62.6
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 1.8e-26 122.9 132 56.8
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 3.0e-26 122.1 129 55.0
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.4e-23 113.2 129 53.5
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 1.4e-23 113.2 117 59.0
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 3.2e-23 112.1 127 53.5
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 9.2e-23 110.5 110 60.9
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 1.6e-22 109.8 153 47.7
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 2.0e-22 109.4 119 55.5
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 8.6e-21 104.0 133 54.9
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 1.6e-19 99.8 129 48.1
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.2e-17 93.6 105 57.1
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 1.2e-17 93.6 124 52.4
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 3.7e-16 88.6 124 46.8
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 4.9e-16 88.2 116 47.4
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 8.3e-16 87.4 130 50.0
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 8.3e-16 87.4 110 50.9
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 8.3e-16 87.4 157 37.6
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 3.2e-15 85.5 118 46.6
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 5.4e-15 84.7 125 47.2
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.7e-14 82.4 121 45.5
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 7.8e-14 80.9 118 46.6
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 7.8e-14 80.9 118 46.6
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.3e-13 80.1 130 47.7
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 1.7e-13 79.7 112 49.1
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.5e-12 76.6 116 44.8
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.5e-12 76.6 116 44.8
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 1.5e-12 76.6 116 44.8
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 7.3e-12 74.3 133 45.1
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 9.5e-12 73.9 120 40.8
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 3.6e-11 72.0 131 42.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 1.1e-10 70.5 122 44.3
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 1.8e-10 69.7 110 44.5
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 2.3e-10 69.3 186 31.7
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.1e-10 68.9 130 41.5
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 4.0e-10 68.6 136 39.7
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 4.0e-10 68.6 124 40.3
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 5.2e-10 68.2 132 39.4
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.2e-09 67.0 110 47.3
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 1.5e-09 66.6 134 39.6
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 1.5e-09 66.6 134 39.6
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 1.5e-09 66.6 134 39.6
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.6e-09 65.9 136 36.8
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 4.4e-09 65.1 141 36.9
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 5.8e-09 64.7 134 38.1
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 5.8e-09 64.7 138 39.9
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 7.5e-09 64.3 134 38.1
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 7.5e-09 64.3 124 42.7
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 7.5e-09 64.3 141 38.3
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 9.9e-09 63.9 114 43.0
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.3e-08 63.5 134 36.6
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.7e-08 63.2 127 40.9
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 1.7e-08 63.2 141 38.3
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 1.7e-08 63.2 130 39.2
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 1.7e-08 63.2 125 38.4
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 2.2e-08 62.8 133 41.4
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 2.9e-08 62.4 101 45.5
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 3.7e-08 62.0 131 37.4
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 3.7e-08 62.0 130 37.7
QL08p037794 Quercus lobata HOM05D006722 ORTHO05D007944 3.7e-08 62.0 123 41.5
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 4.9e-08 61.6 131 38.2
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 6.4e-08 61.2 132 38.6
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 6.4e-08 61.2 85 48.2
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 6.4e-08 61.2 117 42.7
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 8.3e-08 60.8 134 37.3
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.1e-07 60.5 123 38.2
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.9e-07 59.7 117 39.3
Psat0s3526g0040 Pisum sativum HOM05D006722 ORTHO05D007944 1.9e-07 59.7 114 40.4
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 3.2e-07 58.9 130 36.9
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 9.2e-07 57.4 125 43.2
Gohir.D01G197650 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.2e-06 57.0 117 38.5
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 3.5e-06 55.5 141 36.9
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 4.6e-06 55.1 132 38.6
SalBow1G4058 Salvia bowleyana HOM05D006722 ORTHO05D007944 6.0e-06 54.7 51 64.7


User provided reference genes

Program Settings