Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 5.0e-229 797.3 383 100.0
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.0e-189 665.2 392 82.9
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 4.3e-172 608.2 385 76.6
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.4e-170 603.2 378 77.8
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.3e-168 596.7 379 76.0
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.3e-165 586.6 376 75.3
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 8.7e-165 583.9 383 74.2
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 9.6e-164 580.5 364 76.4
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 5.1e-157 558.1 319 83.1
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 3.9e-149 531.9 327 76.8
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.9e-149 531.9 327 76.8
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 2.1e-147 526.2 328 74.4
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.1e-146 523.9 329 74.8
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 3.1e-146 522.3 343 72.9
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 6.9e-146 521.2 342 73.1
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 9.0e-146 520.8 326 73.9
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.7e-144 516.5 345 69.6
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.7e-144 516.5 330 73.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 2.9e-144 515.8 332 72.9
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.1e-143 513.8 346 69.9
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.9e-143 513.1 326 74.2
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.2e-143 511.9 327 74.3
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.1e-142 509.6 342 70.2
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.1e-142 509.6 328 72.6
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 5.1e-141 505.0 340 70.3
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.6e-139 500.0 342 69.3
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.8e-139 499.2 347 68.0
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.8e-139 498.4 329 72.0
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.1e-138 497.3 342 69.3
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.4e-138 496.9 330 70.0
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.4e-138 496.9 330 70.0
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.8e-138 496.5 317 73.5
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 2.4e-138 496.1 342 68.7
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 4.1e-138 495.4 333 72.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 5.3e-138 495.0 346 68.5
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.0e-137 493.0 330 69.4
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 7.7e-137 491.1 328 71.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.2e-136 489.6 338 69.8
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 3.8e-136 488.8 365 65.5
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 8.5e-136 487.6 308 74.0
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.9e-135 486.5 400 60.8
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 4.2e-135 485.3 331 68.3
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 9.4e-135 484.2 371 64.4
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.7e-134 482.6 337 67.1
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 6.1e-134 481.5 356 67.1
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 3.0e-133 479.2 328 70.7
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 3.9e-133 478.8 327 68.5
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 6.7e-133 478.0 328 70.7
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 1.5e-132 476.9 332 69.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 2.0e-132 476.5 329 69.6
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 2.0e-132 476.5 329 69.6
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 2.5e-132 476.1 327 69.1
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 3.3e-132 475.7 326 68.4
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 5.7e-132 474.9 328 69.8
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 7.4e-132 474.6 338 68.3
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 9.7e-132 474.2 332 67.8
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 9.7e-132 474.2 329 68.7
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.3e-131 473.8 329 69.6
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.7e-131 473.4 325 65.5
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.2e-131 473.0 328 68.0
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 2.8e-131 472.6 328 69.8
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 3.7e-131 472.2 340 65.9
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 4.8e-131 471.9 328 67.4
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 6.3e-131 471.5 334 68.3
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.8e-130 469.9 339 66.1
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.8e-130 469.9 332 66.9
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 5.3e-130 468.4 366 61.7
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.2e-129 467.2 327 67.0
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.2e-129 467.2 348 64.4
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.2e-128 463.0 328 67.1
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 3.8e-128 462.2 352 64.8
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.6e-124 449.5 326 65.3
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.9e-119 433.3 329 60.2
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.9e-119 433.3 328 64.0
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 2.1e-118 429.9 394 54.6
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.1e-116 424.1 339 59.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.6e-116 422.9 338 60.1
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 3.3e-116 422.5 275 70.5
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 3.3e-116 422.5 337 62.0
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.7e-115 420.2 359 59.1
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 6.3e-115 418.3 342 60.8
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.1e-114 416.0 365 59.2
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.1e-114 415.6 338 60.9
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.6e-113 413.7 365 59.5
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 4.5e-113 412.1 329 60.5
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.3e-112 410.6 265 71.3
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.1e-110 403.3 486 47.1
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 1.6e-105 387.1 259 67.2
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 3.8e-104 382.5 242 72.3
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 9.4e-103 377.9 272 65.4
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.2e-101 372.1 320 58.4
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.4e-98 364.0 303 60.4
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 4.1e-98 362.5 235 70.6
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 9.2e-98 361.3 170 97.6
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.4e-90 337.4 322 49.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.6e-88 328.6 328 52.7
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.5e-84 317.4 376 47.9
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.9e-82 310.5 321 47.7
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.7e-81 306.6 232 59.9
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 5.8e-76 288.9 330 44.8
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.0e-72 278.1 173 68.8
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 7.3e-63 245.4 351 40.2
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.3e-48 198.0 106 93.4
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.0e-40 170.2 146 53.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.4e-31 139.0 78 78.2
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.3e-27 128.3 100 65.0
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.6e-20 104.0 71 76.1
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.8e-14 83.2 100 44.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.2e-14 82.4 47 70.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.8e-13 81.3 95 46.3
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 9.4e-10 68.9 38 76.3
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.6e-09 68.2 52 71.2
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.8e-06 57.4 47 46.8


User provided reference genes

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