Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 4.2e-253 877.5 422 100.0
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.8e-248 862.1 422 98.6
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 5.2e-227 790.8 422 90.5
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.6e-223 779.2 422 88.9
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 9.1e-216 753.4 421 86.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 6.1e-212 740.7 408 84.8
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.4e-210 734.9 421 82.7
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.8e-208 729.2 421 81.9
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.1e-205 719.9 424 79.0
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.1e-204 715.7 424 78.1
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.7e-204 714.5 424 77.8
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.0e-202 709.1 424 77.6
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 3.1e-200 701.8 423 76.8
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.0e-199 699.1 422 76.1
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.3e-198 696.4 422 76.5
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.3e-198 695.7 424 75.7
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 6.6e-198 694.1 425 76.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.1e-197 693.3 423 76.1
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.1e-197 693.3 412 77.7
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.5e-197 693.0 411 78.3
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 9.5e-197 690.3 424 75.0
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.6e-196 689.5 427 74.2
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.6e-196 689.5 428 75.5
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 2.1e-196 689.1 422 75.1
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 2.8e-196 688.7 413 78.2
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 2.8e-196 688.7 421 76.0
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.8e-195 686.0 423 76.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 4.0e-195 684.9 421 75.3
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.4e-194 681.8 425 73.4
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 4.4e-194 681.4 424 73.6
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 7.5e-194 680.6 414 75.1
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 3.7e-193 678.3 420 74.3
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.1e-192 676.8 422 74.4
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.1e-192 676.8 414 74.4
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 3.2e-192 675.2 426 73.0
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 4.1e-192 674.9 422 74.9
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 4.1e-192 674.9 426 72.8
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 4.1e-192 674.9 425 72.7
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.2e-191 673.3 426 72.5
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-190 669.8 415 75.2
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 1.7e-190 669.5 426 73.0
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 5.0e-190 667.9 423 74.0
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 6.6e-190 667.5 406 76.8
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 6.6e-190 667.5 423 73.5
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.1e-189 666.8 423 73.8
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.1e-189 666.8 424 73.8
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.5e-189 663.7 426 73.2
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.6e-188 662.9 426 70.7
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 1.6e-188 662.9 425 71.8
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.6e-188 662.9 425 71.5
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.8e-188 662.1 424 73.1
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 8.0e-188 660.6 424 73.1
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 8.0e-188 660.6 424 73.1
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.1e-187 660.2 424 72.9
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.1e-187 660.2 424 72.6
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 2.3e-187 659.1 422 71.8
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 4.0e-187 658.3 451 69.6
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.5e-186 656.4 424 72.2
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 2.0e-186 656.0 424 72.6
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 5.8e-186 654.4 416 72.1
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.3e-185 653.3 409 76.0
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.7e-185 652.9 422 73.2
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 2.2e-185 652.5 423 73.0
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.9e-185 651.4 424 71.0
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 4.1e-184 648.3 425 69.9
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.0e-183 646.0 413 71.2
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 3.5e-183 645.2 423 69.7
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 3.5e-183 645.2 424 71.7
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.9e-182 641.7 421 71.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 3.3e-181 638.6 422 67.3
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 5.6e-181 637.9 398 71.6
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 9.5e-181 637.1 410 71.0
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.8e-179 632.9 541 59.1
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 3.1e-179 632.1 403 73.0
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.5e-178 629.8 426 70.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.0e-178 629.4 425 67.3
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-177 626.7 415 71.3
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 7.1e-176 620.9 426 68.8
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.6e-175 619.8 413 69.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 2.5e-173 612.5 435 67.8
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 5.2e-171 604.7 394 73.4
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 6.8e-171 604.4 404 68.6
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 9.9e-170 600.5 469 63.8
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 3.2e-168 595.5 413 70.7
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.1e-165 587.0 413 67.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.6e-164 583.2 459 62.5
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 2.6e-162 575.9 420 62.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.9e-157 559.7 365 73.4
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.8e-150 536.6 424 60.1
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.4e-147 526.9 390 64.9
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.6e-143 513.5 313 75.7
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 7.9e-143 511.1 314 75.2
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 5.3e-139 498.4 388 65.2
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 9.3e-136 487.6 424 58.5
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.4e-94 350.9 347 44.7
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 8.8e-94 348.2 203 78.3
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 6.3e-92 342.0 212 73.1
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.8e-86 323.9 345 45.5
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 4.9e-84 315.8 208 67.3
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 4.1e-83 312.8 347 42.4
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 5.0e-73 279.3 367 36.5
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.3e-60 238.0 281 40.9
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 8.1e-47 192.2 106 79.2
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 3.5e-34 150.2 86 80.2
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 7.9e-34 149.1 106 64.2
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 8.7e-33 145.6 139 56.8
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 7.4e-32 142.5 109 61.5
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 7.4e-32 142.5 109 61.5
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 2.8e-31 140.6 106 61.3
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.3e-09 67.8 49 63.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.9e-09 67.0 66 50.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 6.7e-09 66.2 49 63.3
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.1e-08 65.5 56 55.4
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.1e-08 65.5 63 50.8
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.3e-06 56.6 48 56.2


User provided reference genes

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