Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 8.1e-284 979.9 571 100.0
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 8.0e-191 671.0 487 81.3
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 7.9e-154 548.1 565 66.7
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 6.7e-137 491.9 568 64.4
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 2.6e-125 453.4 664 51.4
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 1.5e-107 394.4 529 52.4
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 1.3e-103 381.3 603 47.4
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 3.6e-98 363.2 469 50.1
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 6.6e-84 315.8 471 46.1
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 1.8e-81 307.8 551 44.5
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 5.1e-44 183.3 597 40.0
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 6.2e-42 176.4 539 35.3
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 2.6e-40 171.0 605 36.0
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 4.2e-38 163.7 604 35.6
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 1.9e-35 154.8 559 34.0
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 5.6e-35 153.3 564 36.5
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 2.1e-34 151.4 608 35.7
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 6.2e-34 149.8 612 33.8
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 1.1e-33 149.1 479 32.8
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 3.1e-33 147.5 663 37.0
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 7.6e-32 142.9 610 36.7
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 3.2e-30 137.5 557 34.5
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 3.2e-30 137.5 607 36.7
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 5.5e-30 136.7 482 33.8
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 1.0e-28 132.5 373 33.8
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.3e-28 132.1 549 31.0
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 5.1e-28 130.2 607 36.7
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.1e-27 129.0 577 34.0
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 1.5e-27 128.6 522 31.2
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.9e-27 128.3 577 34.5
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.9e-27 128.3 468 34.0
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 4.3e-27 127.1 460 33.0
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 5.7e-27 126.7 585 30.6
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 5.7e-27 126.7 613 35.4
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 9.6e-27 125.9 432 31.9
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 1.3e-26 125.6 484 36.4
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 6.9e-25 119.8 563 29.7
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 2.0e-24 118.2 613 30.5
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 7.6e-24 116.3 611 30.1
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 1.0e-23 115.9 638 29.8
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 1.4e-22 112.1 500 30.8
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 4.2e-22 110.5 473 30.7
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 7.2e-22 109.8 571 33.8
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 9.3e-22 109.4 419 31.5
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.0e-20 105.9 534 27.7
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.3e-20 104.8 568 29.2
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 7.4e-19 99.8 457 31.3
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 9.7e-19 99.4 544 26.5
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 2.8e-18 97.8 538 32.5
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 6.3e-18 96.7 514 29.6
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 3.4e-16 90.9 526 31.9
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 5.9e-16 90.1 260 35.4
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 1.0e-15 89.4 409 32.3
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 2.9e-15 87.8 468 28.4
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 1.4e-12 79.0 223 36.3
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 1.5e-11 75.5 567 29.1
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 1.5e-11 75.5 586 29.0
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 5.7e-11 73.6 435 29.2
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 2.2e-10 71.6 344 28.2
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 2.8e-10 71.2 216 39.4
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 8.2e-10 69.7 450 29.8
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.1e-09 69.3 519 27.0
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.8e-09 68.6 525 25.3
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 2.4e-09 68.2 470 28.7
TPR.G16985 Trifolium pratense HOM05D007892 ORTHO05D009211 1.2e-08 65.9 96 47.9
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 1.3e-07 62.4 508 26.6
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 3.8e-07 60.8 504 30.8
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 6.5e-07 60.1 422 26.1
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 8.5e-07 59.7 538 28.1
Peaxi162Scf00069g01735 Petunia axillaris HOM05D021138 ORTHO05D009211 8.5e-07 59.7 450 27.8
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 8.5e-07 59.7 37 81.1
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 5.5e-06 57.0 404 27.7


User provided reference genes

Program Settings