Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G260000 Glycine max HOM05D012055 ORTHO05D014183 2.7e-132 475.3 235 100.0
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 2.1e-84 316.2 169 91.7
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 3.4e-55 219.2 169 74.0
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 4.1e-40 169.1 170 60.0
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 8.5e-38 161.4 167 56.9
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 1.6e-28 130.6 167 49.7
TPR.G26651 Trifolium pratense HOM05D012055 ORTHO05D014183 3.0e-27 126.3 166 48.2
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 1.2e-26 124.4 165 50.9
Medtr2g071740 Medicago truncatula HOM05D012055 ORTHO05D014183 3.4e-26 122.9 165 50.9
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 4.4e-26 122.5 165 48.5
Medtr2g071790 Medicago truncatula HOM05D012055 ORTHO05D014183 1.7e-25 120.6 165 47.9
Psat1g009360 Pisum sativum HOM05D012055 ORTHO05D014183 2.2e-25 120.2 164 48.8
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 1.1e-24 117.9 166 45.8
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 1.4e-24 117.5 139 52.5
TPR.G26637 Trifolium pratense HOM05D012055 ORTHO05D014183 1.0e-22 111.3 166 46.4
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 1.1e-13 81.3 182 34.6
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 1.1e-13 81.3 143 42.0
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 1.6e-12 77.4 175 34.3
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 5.2e-11 72.4 178 35.4
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.5e-10 70.9 145 37.9
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 5.8e-10 68.9 182 34.6
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.7e-09 67.4 176 32.4
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.2e-09 67.0 157 34.4
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 2.2e-09 67.0 173 32.9
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 2.9e-09 66.6 173 32.4
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 1.1e-08 64.7 166 31.9
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.1e-08 64.7 150 34.0
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 1.9e-08 63.9 160 31.9
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.9e-08 63.9 160 31.9
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.4e-08 63.5 160 31.9
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 3.2e-08 63.2 160 32.5
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 4.1e-08 62.8 168 31.0
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 9.2e-08 61.6 160 30.6
Glyma.13G260100 Glycine max HOM05D010689 ORTHO05D012855 1.6e-07 60.8 137 32.8
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 1.6e-07 60.8 164 31.1
Glyma.15G247900 Glycine max HOM05D010689 ORTHO05D012855 2.0e-07 60.5 117 35.0
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 2.0e-07 60.5 175 32.6
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 4.6e-07 59.3 160 30.6
Lalb_Chr01g0016121 Lupinus albus HOM05D010689 ORTHO05D012855 4.6e-07 59.3 149 30.2
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 6.0e-07 58.9 135 30.4
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 7.8e-07 58.5 162 31.5
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.3e-06 57.8 152 31.6
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 3.0e-06 56.6 176 33.0
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 5.0e-06 55.8 161 29.8
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 6.6e-06 55.5 173 28.9
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 6.6e-06 55.5 177 29.9
Glyma.13G260401 Glycine max HOM05D010689 ORTHO05D012855 8.6e-06 55.1 116 32.8
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 8.6e-06 55.1 169 29.0


User provided reference genes

Program Settings