Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 6.7e-90 334.0 165 100.0
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 8.8e-74 280.4 197 76.6
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 8.0e-67 257.3 129 98.4
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 2.6e-57 225.7 260 52.7
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 9.8e-57 223.8 263 53.2
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 4.9e-48 194.9 263 46.4
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 1.1e-47 193.7 184 58.7
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 1.1e-47 193.7 263 46.8
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 1.9e-47 193.0 181 59.7
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 1.6e-43 179.9 257 44.4
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 8.9e-42 174.1 257 43.6
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 2.0e-41 172.9 168 56.5
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 9.9e-41 170.6 174 53.4
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 1.9e-39 166.4 168 54.8
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 2.4e-39 166.0 257 40.9
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 5.4e-39 164.9 184 51.6
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 8.4e-32 141.0 173 49.7
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 2.4e-31 139.4 259 39.4
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 6.6e-29 131.3 173 45.7
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 1.1e-28 130.6 260 35.8
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 1.1e-28 130.6 186 44.1
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.1e-28 130.6 186 44.1
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 5.6e-28 128.3 196 41.3
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 9.6e-28 127.5 178 46.1
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.6e-27 125.6 255 35.7
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 6.2e-27 124.8 164 46.3
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 6.2e-27 124.8 173 42.2
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 1.1e-26 124.0 260 35.8
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.1e-26 124.0 171 45.6
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.1e-26 124.0 172 43.6
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 1.1e-26 124.0 172 43.6
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 1.1e-26 124.0 259 37.1
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.8e-26 123.2 260 35.4
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 1.8e-26 123.2 181 44.2
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 3.1e-26 122.5 257 35.8
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 4.0e-26 122.1 167 43.7
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 4.0e-26 122.1 171 42.7
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 4.0e-26 122.1 198 42.9
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.0e-26 122.1 171 45.0
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 4.0e-26 122.1 187 40.6
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 5.3e-26 121.7 175 44.0
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 5.3e-26 121.7 203 39.4
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 6.9e-26 121.3 261 34.1
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 6.9e-26 121.3 171 45.0
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 9.0e-26 120.9 171 43.3
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 1.2e-25 120.6 171 43.9
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.6e-25 119.4 260 33.5
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 2.6e-25 119.4 180 42.2
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 3.4e-25 119.0 166 44.6
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 3.4e-25 119.0 162 44.4
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 3.4e-25 119.0 177 40.7
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 9.9e-25 117.5 195 39.0
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 9.9e-25 117.5 187 40.6
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 1.7e-24 116.7 166 44.6
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 2.2e-24 116.3 167 43.7
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.2e-24 116.3 247 34.0
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 2.9e-24 115.9 244 35.2
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 4.9e-24 115.2 170 44.1
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 4.9e-24 115.2 138 47.1
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 8.4e-24 114.4 176 40.9
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 1.1e-23 114.0 165 44.2
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 1.9e-23 113.2 179 38.5
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.9e-23 113.2 233 35.6
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 1.9e-23 113.2 177 40.7
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 2.4e-23 112.8 173 42.2
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 2.4e-23 112.8 166 39.8
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 3.2e-23 112.5 168 43.5
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 5.4e-23 111.7 186 38.7
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 5.4e-23 111.7 186 39.8
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 7.1e-23 111.3 178 43.3
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 7.1e-23 111.3 172 40.1
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 9.3e-23 110.9 174 41.4
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 1.2e-22 110.5 166 42.8
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 1.6e-22 110.2 249 33.7
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 3.5e-22 109.0 166 42.8
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 6.0e-22 108.2 175 39.4
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 7.9e-22 107.8 176 39.8
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 1.3e-21 107.1 241 33.2
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 3.0e-21 105.9 167 41.9
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 3.9e-21 105.5 161 39.1
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.1e-20 104.0 166 39.2
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 1.5e-20 103.6 231 33.3
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 1.5e-20 103.6 231 33.3
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 1.9e-20 103.2 163 41.7
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 1.9e-20 103.2 171 38.0
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 3.3e-20 102.4 162 39.5
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 3.3e-20 102.4 204 36.3
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 4.3e-20 102.1 235 32.8
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 4.3e-20 102.1 171 38.0
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 5.6e-20 101.7 187 37.4
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 5.6e-20 101.7 163 38.7
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 5.6e-20 101.7 166 38.6
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 7.4e-20 101.3 210 35.2
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 7.4e-20 101.3 163 39.9
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 9.6e-20 100.9 163 41.1
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.3e-19 100.5 143 42.7
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.3e-19 100.5 180 37.8
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.6e-19 100.1 235 32.8
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 2.1e-19 99.8 235 32.3
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 2.1e-19 99.8 173 37.6
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 2.1e-19 99.8 173 37.6
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 3.6e-19 99.0 163 39.3
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 8.1e-19 97.8 157 39.5
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 1.1e-18 97.4 167 41.9
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 1.4e-18 97.1 164 40.2
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 4.0e-18 95.5 171 36.3
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 3.4e-17 92.4 190 32.1
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 4.5e-17 92.0 97 58.8
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 5.8e-17 91.7 161 35.4
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 7.6e-17 91.3 142 36.6
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 1.3e-16 90.5 187 35.3
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 2.7e-14 82.8 223 32.7
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 3.0e-13 79.3 223 32.7
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 9.6e-12 74.3 210 28.1
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.1e-11 73.2 191 26.7
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.1e-11 73.2 191 26.7
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 8.1e-11 71.2 168 28.0
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 7.6e-09 64.7 175 33.7
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 7.6e-09 64.7 179 29.1
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 1.4e-07 60.5 72 38.9


User provided reference genes

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