Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.1e-153 546.6 278 100.0
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 6.1e-144 514.2 278 95.0
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.4e-119 433.3 278 79.9
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.2e-118 430.3 278 80.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 2.5e-89 332.8 277 64.6
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.0e-86 323.2 275 67.3
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 2.9e-85 319.3 272 65.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 3.8e-85 318.9 265 64.2
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 5.5e-84 315.1 265 64.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.6e-83 312.0 284 64.1
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 7.9e-83 311.2 275 65.8
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 3.7e-80 302.4 292 60.3
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.9e-69 266.2 300 54.3
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 4.2e-68 262.3 234 62.8
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.3e-65 252.7 281 54.8
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.4e-60 237.3 269 56.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 7.0e-55 218.4 311 46.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 6.5e-53 211.8 285 47.4
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.5e-53 211.8 268 48.5
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.1e-52 211.1 299 46.8
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.1e-52 211.1 281 45.9
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 9.4e-52 208.0 300 46.7
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.2e-51 207.6 270 49.6
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.9e-50 202.6 260 49.6
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 9.7e-49 198.0 272 49.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 9.7e-49 198.0 272 49.3
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.3e-48 197.6 300 45.7
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.3e-48 197.6 240 50.0
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.3e-48 197.6 278 45.7
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 2.2e-48 196.8 268 50.4
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.8e-47 193.7 250 49.2
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.1e-47 192.6 260 46.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 7.0e-47 191.8 266 45.5
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 7.0e-47 191.8 266 45.5
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.1e-47 191.4 261 47.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.2e-46 191.0 254 49.6
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 5.5e-44 182.2 270 45.6
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.3e-42 176.8 262 44.7
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.3e-42 176.8 302 42.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.2e-41 174.5 255 47.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.7e-40 170.6 282 41.1
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.3e-40 168.3 262 44.3
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.4e-39 166.8 268 43.3
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 7.0e-39 165.2 265 44.9
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.2e-38 164.5 208 51.0
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.0e-37 161.4 252 47.2
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.0e-37 161.4 269 43.1
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 5.0e-37 159.1 236 45.8
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 8.5e-37 158.3 257 45.1
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.1e-36 157.9 236 47.9
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.9e-36 157.1 285 41.1
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 3.2e-36 156.4 248 44.4
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 9.4e-36 154.8 254 44.1
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.2e-35 154.5 256 44.5
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.6e-35 154.1 278 41.7
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.7e-35 152.5 256 44.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 4.7e-35 152.5 271 45.8
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 5.2e-34 149.1 248 43.5
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.6e-33 146.7 210 46.7
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 4.4e-33 146.0 239 42.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 5.7e-33 145.6 237 40.5
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.7e-32 144.1 270 41.1
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.2e-32 143.7 261 42.5
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.3e-32 142.1 133 56.4
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.8e-31 140.6 255 42.0
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.1e-31 139.8 259 41.7
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.4e-31 139.0 258 42.6
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 9.1e-31 138.3 272 41.2
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 4.5e-30 136.0 242 41.7
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.9e-30 135.6 261 39.5
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.3e-29 133.7 284 39.1
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.9e-29 133.3 267 39.7
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.1e-28 131.3 259 40.2
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.5e-28 130.2 248 41.1
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 3.3e-28 129.8 250 42.8
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.2e-27 127.9 290 36.2
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.6e-27 126.3 249 41.8
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.6e-27 126.3 290 38.3
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 8.0e-27 125.2 244 42.2
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 2.0e-25 120.6 253 40.3
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 3.4e-25 119.8 240 40.4
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 5.7e-25 119.0 256 37.1
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 9.8e-25 118.2 253 37.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.3e-24 117.9 254 37.4
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.8e-24 116.7 256 39.1
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.8e-24 116.7 254 39.0
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 3.7e-24 116.3 212 38.2
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 4.9e-24 115.9 224 40.6
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 8.3e-24 115.2 346 32.9
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.1e-23 114.8 254 37.0
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.4e-23 114.4 114 57.0
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 4.1e-23 112.8 246 37.4
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 7.0e-23 112.1 330 33.0
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.6e-22 110.9 247 36.4
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.0e-21 108.2 253 36.4
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.3e-21 107.8 203 40.9
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.9e-21 106.7 255 35.7
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.9e-21 106.3 244 39.8
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.9e-21 106.3 244 39.8
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.9e-20 104.0 128 45.3
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 2.5e-20 103.6 124 44.4
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.3e-20 102.8 253 37.9
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 9.5e-20 101.7 146 42.5
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.2e-19 101.3 253 34.8
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 3.6e-19 99.8 255 38.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 4.7e-19 99.4 264 36.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.8e-18 97.4 314 33.8
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.8e-18 97.4 255 37.3
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-18 97.1 255 36.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 4.0e-18 96.3 267 33.0
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.2e-17 94.7 267 33.7
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.5e-17 94.4 204 35.3
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-16 90.9 137 43.8
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 2.7e-14 83.6 79 53.2
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 3.6e-11 73.2 155 36.1
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 7.1e-07 58.9 137 40.9


User provided reference genes

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