Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 8.2e-79 297.0 149 100.0
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 1.7e-55 219.5 129 89.1
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.9e-39 165.6 121 71.9
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 1.1e-38 163.7 126 68.3
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 7.3e-35 151.0 130 66.9
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 6.8e-33 144.4 126 65.1
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 1.1e-30 137.1 127 63.8
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 2.4e-30 136.0 126 62.7
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 3.2e-30 135.6 126 57.9
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 9.2e-30 134.0 126 60.3
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 9.2e-30 134.0 127 61.4
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 2.1e-29 132.9 142 57.7
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 1.7e-28 129.8 134 53.7
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.7e-28 129.8 132 55.3
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.3e-28 129.4 127 61.4
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 3.0e-28 129.0 107 65.4
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 3.0e-28 129.0 107 65.4
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 8.7e-28 127.5 132 53.8
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 4.3e-27 125.2 131 55.7
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 4.3e-27 125.2 127 53.5
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 4.3e-27 125.2 126 58.7
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 2.8e-26 122.5 142 57.0
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.4e-25 120.2 128 51.6
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.8e-25 119.8 128 51.6
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.8e-25 119.8 128 51.6
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 1.8e-25 119.8 132 54.5
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 4.0e-25 118.6 132 54.5
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.2e-24 117.1 130 53.8
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 1.5e-24 116.7 130 53.1
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 2.6e-24 115.9 132 50.8
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 5.8e-24 114.8 130 50.8
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 7.6e-24 114.4 130 50.0
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.3e-23 113.6 127 50.4
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 2.9e-23 112.5 135 51.9
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 2.9e-23 112.5 135 51.1
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 3.8e-23 112.1 131 51.1
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 1.4e-22 110.2 131 52.7
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 1.9e-22 109.8 133 51.1
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 4.2e-22 108.6 132 49.2
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 5.4e-22 108.2 130 50.0
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 7.1e-22 107.8 132 47.7
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 9.3e-22 107.5 130 50.0
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.2e-21 107.1 144 47.2
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.1e-21 106.3 135 47.4
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.1e-21 106.3 148 47.3
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.7e-21 105.9 132 47.0
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 4.6e-21 105.1 132 47.0
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.0e-20 104.0 112 55.4
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 3.9e-20 102.1 124 53.2
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 3.9e-20 102.1 128 49.2
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 5.1e-20 101.7 120 53.3
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 6.6e-20 101.3 107 53.3
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 8.7e-20 100.9 127 49.6
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.1e-19 100.5 131 48.1
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.1e-19 100.5 116 53.4
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 1.5e-19 100.1 142 42.3
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.5e-19 100.1 134 42.5
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 2.5e-19 99.4 131 47.3
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 3.3e-19 99.0 135 48.1
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 3.3e-19 99.0 129 45.7
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 5.6e-19 98.2 131 47.3
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 9.6e-19 97.4 121 47.1
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 1.3e-18 97.1 125 47.2
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 1.3e-18 97.1 125 47.2
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.3e-18 97.1 130 47.7
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.3e-18 97.1 125 46.4
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.3e-18 97.1 129 45.0
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 1.6e-18 96.7 125 47.2
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.1e-18 96.3 125 46.4
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 2.8e-18 95.9 137 46.0
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 2.8e-18 95.9 127 46.5
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 3.6e-18 95.5 136 42.6
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 8.1e-18 94.4 131 46.6
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 8.1e-18 94.4 136 46.3
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 1.1e-17 94.0 125 46.4
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 1.1e-17 94.0 125 46.4
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.4e-17 93.6 139 43.9
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.4e-17 93.6 139 43.9
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.4e-17 93.6 128 43.8
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 2.4e-17 92.8 127 45.7
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 6.9e-17 91.3 140 43.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 9.0e-17 90.9 132 45.5
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 9.0e-17 90.9 125 41.6
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 9.0e-17 90.9 124 46.0
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 9.0e-17 90.9 126 49.2
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 1.5e-16 90.1 105 47.6
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.0e-16 89.7 140 43.6
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 4.5e-16 88.6 104 52.9
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 5.8e-16 88.2 111 48.6
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 7.6e-16 87.8 140 42.9
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 3.8e-15 85.5 122 45.1
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 1.1e-14 84.0 102 47.1
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 2.1e-13 79.7 102 48.0
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 1.0e-12 77.4 132 41.7
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.0e-12 77.4 124 37.9
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.0e-12 77.4 124 37.9
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 2.3e-12 76.3 102 46.1
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 6.7e-12 74.7 151 37.1
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 6.7e-12 74.7 151 37.1
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.4e-09 67.0 152 34.2
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 1.4e-06 57.0 60 45.0
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 1.4e-06 57.0 60 45.0
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 1.4e-06 57.0 60 45.0


User provided reference genes

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