Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 1.2e-79 299.7 135 100.0
Phvul.006G164600 Phaseolus vulgaris HOM05D014907 ORTHO05D010556 4.1e-53 211.5 135 73.3
Glyma.13G218125 Glycine max HOM05D014907 ORTHO05D010556 4.1e-37 158.3 137 56.9
VMungo0540G1755 Vigna mungo HOM05D014907 ORTHO05D010556 1.9e-29 132.9 98 68.4
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 7.3e-26 120.9 129 47.3
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 9.6e-26 120.6 127 49.6
TPR.G17735 Trifolium pratense HOM05D014907 ORTHO05D010556 6.9e-24 114.4 128 47.7
Medtr2g461570 Medicago truncatula HOM05D014907 ORTHO05D010556 1.7e-22 109.8 131 42.7
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 8.4e-14 80.9 131 32.8
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 9.3e-13 77.4 137 33.6
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 1.0e-11 73.9 127 34.6
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 2.3e-11 72.8 124 33.9
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 5.1e-11 71.6 140 32.1
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.1e-10 70.5 124 33.1
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.3e-09 67.0 129 29.5
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 1.3e-09 67.0 132 31.8
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 1.6e-09 66.6 128 28.1
RcHm_v2.0_Chr4g0396821 Rosa chinensis HOM05D008849 ORTHO05D010556 2.1e-09 66.2 103 34.0
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 2.1e-09 66.2 101 34.7
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 4.8e-09 65.1 105 29.5
COL.COLO4_34095 Corchorus olitorius HOM05D008849 ORTHO05D010556 8.2e-09 64.3 131 28.2
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 1.4e-08 63.5 72 38.9
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 3.1e-08 62.4 102 25.5
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 2.0e-07 59.7 127 26.8
Potri.002G263900 Populus trichocarpa HOM05D008849 ORTHO05D010556 2.6e-07 59.3 125 26.4
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 3.4e-07 58.9 126 28.6
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 4.5e-07 58.5 131 30.5
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 7.6e-07 57.8 129 30.2
Glyma.13G192300 Glycine max HOM05D009801 ORTHO05D011967 7.6e-07 57.8 120 27.5
TPR.G10407 Trifolium pratense HOM05D009801 ORTHO05D011967 7.6e-07 57.8 126 31.7
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 1.0e-06 57.4 103 31.1
Psat3g162040 Pisum sativum HOM05D018373 ORTHO05D020881 1.0e-06 57.4 123 31.7
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 1.3e-06 57.0 95 31.6
Medtr3g023810 Medicago truncatula HOM05D009801 ORTHO05D011967 1.7e-06 56.6 128 33.6
Glyma.09G090600 Glycine max HOM05D009801 ORTHO05D011967 2.9e-06 55.8 108 25.9
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 3.8e-06 55.5 105 28.6
Lalb_Chr21g0307151 Lupinus albus HOM05D009801 ORTHO05D011967 4.9e-06 55.1 126 30.2
Lalb_Chr23g0276871 Lupinus albus HOM05D009801 ORTHO05D011967 8.4e-06 54.3 128 29.7
PGSC0003DMG400041803 Solanum tuberosum HOM05D065601 ORTHO05D051329 8.4e-06 54.3 128 28.1


User provided reference genes

Program Settings