Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 8.1e-241 836.6 420 100.0
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 8.3e-193 677.2 422 83.4
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 2.7e-175 619.0 429 77.2
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.6e-173 611.3 424 76.9
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 5.2e-147 525.0 429 66.9
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 9.3e-144 514.2 422 67.1
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 8.7e-142 507.7 460 62.0
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.6e-132 476.9 481 58.8
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 7.6e-130 468.0 488 56.6
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 5.8e-122 441.8 403 64.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 2.9e-121 439.5 413 63.2
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 9.7e-109 397.9 338 65.4
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 6.3e-108 395.2 361 63.2
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 2.6e-101 373.2 434 49.3
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 6.5e-97 358.6 437 50.1
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 1.1e-96 357.8 430 49.5
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 3.3e-93 346.3 432 49.3
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 4.2e-88 329.3 432 48.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.5e-85 320.9 447 47.2
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 8.2e-84 315.1 430 45.6
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.2e-82 311.2 416 45.9
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.2e-79 301.2 437 45.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 6.1e-79 298.9 434 45.2
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 8.0e-79 298.5 426 45.5
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.3e-78 297.0 496 40.7
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 3.0e-78 296.6 418 45.2
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 8.8e-78 295.0 429 43.8
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.0e-77 293.9 427 43.3
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 4.4e-77 292.7 427 43.3
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 5.7e-77 292.4 411 44.3
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.0e-73 281.6 410 43.9
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 8.6e-73 278.5 428 43.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.1e-72 278.1 419 45.1
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 5.5e-72 275.8 442 43.0
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.7e-71 272.7 434 43.1
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 8.0e-71 271.9 467 40.5
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 8.0e-71 271.9 426 40.8
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.3e-68 264.6 342 46.8
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 6.3e-68 262.3 405 43.0
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 2.7e-66 256.9 430 42.1
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.7e-66 256.9 430 42.1
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 2.7e-66 256.9 436 38.1
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.8e-65 253.1 430 41.9
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.1e-64 251.5 428 41.4
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.8e-62 244.2 426 40.1
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 4.4e-61 239.6 448 40.2
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 2.2e-60 237.3 436 39.9
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 1.7e-57 227.6 422 39.1
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 3.3e-56 223.4 430 39.3
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.6e-55 221.1 428 37.1
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.6e-55 219.9 440 38.2
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 3.6e-55 219.9 346 42.5
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 5.4e-51 206.1 240 50.4
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 1.2e-50 204.9 337 37.4
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.6e-50 204.5 445 36.4
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 3.5e-50 203.4 373 38.6
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.8e-50 202.2 428 36.9
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 6.6e-49 199.1 366 38.0
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.5e-48 197.2 436 32.6
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 2.5e-48 197.2 374 38.0
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 4.3e-48 196.4 429 35.4
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.8e-47 193.7 418 36.8
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 2.8e-47 193.7 453 33.8
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 4.7e-47 193.0 417 34.3
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 3.1e-46 190.3 433 32.6
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 2.0e-45 187.6 228 49.6
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 4.4e-45 186.4 301 40.5
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 5.8e-45 186.0 322 36.6
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 5.4e-43 179.5 162 58.6
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.3e-41 174.1 426 31.7
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 7.3e-40 169.1 174 50.6
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 4.0e-38 163.3 392 34.2
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 6.8e-38 162.5 305 35.7
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.7e-36 157.9 374 35.8
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 5.4e-35 152.9 410 31.2
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.3e-33 147.5 414 31.4
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 9.6e-32 142.1 372 31.7
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 2.1e-31 141.0 298 36.6
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 3.6e-31 140.2 354 33.9
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.4e-30 138.3 129 57.4
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 4.0e-30 136.7 220 41.8
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 5.8e-29 132.9 152 49.3
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 4.9e-28 129.8 93 66.7
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 6.4e-28 129.4 175 45.1
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 3.0e-25 120.6 252 37.7
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 4.8e-23 113.2 257 36.2
VMungo0647G1723 Vigna mungo HOM05D007369 ORTHO05D009369 1.2e-18 98.6 80 63.8
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 6.0e-18 96.3 145 37.9
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 2.4e-14 84.3 173 35.8
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.3e-14 83.2 449 26.9
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 1.5e-13 81.6 56 76.8
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 2.0e-13 81.3 137 38.0
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.2e-11 73.9 152 35.5
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.6e-10 71.6 128 41.4
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-07 62.0 76 47.4
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 3.1e-06 57.4 51 54.9
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 5.3e-06 56.6 50 50.0


User provided reference genes

Program Settings