Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G214700 Glycine max HOM05D000584 ORTHO05D000458 9.4e-122 440.3 233 100.0
Glyma.15G098400 Glycine max HOM05D000584 ORTHO05D000458 2.7e-68 262.7 183 80.3
Phvul.006G160900 Phaseolus vulgaris HOM05D000584 ORTHO05D000458 3.7e-49 199.1 183 65.0
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 8.2e-41 171.4 168 62.5
Glyma.17G022400 Glycine max HOM05D000584 ORTHO05D000458 2.2e-38 163.3 203 52.2
Lj4g0000605 Lotus japonicus HOM05D000584 ORTHO05D000458 4.6e-36 155.6 205 50.7
Glyma.07G252000 Glycine max HOM05D000584 ORTHO05D000458 8.2e-33 144.8 203 48.8
VMungo1215G2573 Vigna mungo HOM05D000584 ORTHO05D000458 9.1e-32 141.4 202 47.0
Phvul.003G100500 Phaseolus vulgaris HOM05D000584 ORTHO05D000458 1.5e-31 140.6 202 48.0
Lalb_Chr13g0303881 Lupinus albus HOM05D000584 ORTHO05D000458 2.0e-31 140.2 204 48.5
Medtr4g118760 Medicago truncatula HOM05D000584 ORTHO05D000458 2.6e-31 139.8 191 50.8
Ca_21551_v3 Cicer arietinum L. HOM05D000584 ORTHO05D000458 5.0e-30 135.6 207 44.9
TPR.G14948 Trifolium pratense HOM05D000584 ORTHO05D000458 8.5e-30 134.8 184 51.1
Lalb_Chr07g0177561 Lupinus albus HOM05D000584 ORTHO05D000458 1.4e-29 134.0 196 47.4
arahy.Tifrunner.gnm1.ann1.J5XN66 Arachis hypogaea HOM05D000584 ORTHO05D000458 1.2e-28 131.0 187 46.0
arahy.Tifrunner.gnm1.ann1.E46NXI Arachis hypogaea HOM05D000584 ORTHO05D000458 3.6e-28 129.4 187 45.5
CiPaw.01G153700 Carya illinoinensis HOM05D000584 ORTHO05D000458 1.6e-20 104.0 195 40.5
QL06p007280 Quercus lobata HOM05D000584 ORTHO05D000458 1.6e-20 104.0 218 38.5
Manes.15G017600 Manihot esculenta HOM05D000584 ORTHO05D000458 2.1e-20 103.6 198 37.9
FAN12G2416 Fragaria x ananassa HOM05D000584 ORTHO05D000458 1.1e-18 97.8 190 38.9
FAN07G2899 Fragaria x ananassa HOM05D000584 ORTHO05D000458 2.0e-18 97.1 190 38.4
Psat4g029400 Pisum sativum HOM05D000584 ORTHO05D000458 2.0e-18 97.1 188 42.6
FAN17G2906 Fragaria x ananassa HOM05D000584 ORTHO05D000458 3.3e-18 96.3 190 37.9
Gohir.D10G166200 Gossypium hirsutum HOM05D000584 ORTHO05D000458 7.4e-18 95.1 203 38.9
FvH4_4g17100 Fragaria vesca HOM05D000584 ORTHO05D000458 9.7e-18 94.7 190 38.4
PGR015G0001 Punica granatum HOM05D000584 ORTHO05D000458 9.7e-18 94.7 204 38.7
PGR104G0001 Punica granatum HOM05D000584 ORTHO05D000458 9.7e-18 94.7 204 38.7
GSVIVG01017816001 Vitis vinifera HOM05D000584 ORTHO05D000458 9.7e-18 94.7 203 36.9
Gorai.011G185500 Gossypium raimondii HOM05D000584 ORTHO05D000458 1.3e-17 94.4 203 38.4
Haze_01052 Corylus avellana HOM05D000584 ORTHO05D000458 1.7e-17 94.0 227 34.8
FAN12G0086 Fragaria x ananassa HOM05D000584 ORTHO05D000458 8.2e-17 91.7 190 37.4
Cc02_g32240 Coffea canephora HOM05D000584 ORTHO05D000458 7.0e-16 88.6 187 38.0
vmacro15266 Vaccinium macrocarpon HOM05D000584 ORTHO05D000458 5.9e-15 85.5 203 34.5
Hma1.2p1_0823F.1_g224570 Hydrangea macrophylla HOM05D000584 ORTHO05D000458 2.9e-14 83.2 217 32.3
Gohir.A10G101715 Gossypium hirsutum HOM05D000584 ORTHO05D000458 6.5e-14 82.0 200 37.5
RcHm_v2.0_Chr4g0420891 Rosa chinensis HOM05D000584 ORTHO05D000458 1.9e-13 80.5 165 38.2
Rhsim02G0014000 Rhododendron simsii HOM05D000584 ORTHO05D000458 2.5e-13 80.1 172 37.8
CANSAT78G1702 Cannabis sativa HOM05D000584 ORTHO05D000458 3.2e-13 79.7 203 35.0
MBI18_g08812_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 3.2e-13 79.7 186 36.0
Eucgr.H03764 Eucalyptus grandis HOM05D000584 ORTHO05D000458 5.5e-13 79.0 176 37.5
Cfa015500 Carpinus fangiana HOM05D000584 ORTHO05D000458 6.1e-12 75.5 164 35.4
Sed0005759 Sechium edule HOM05D000584 ORTHO05D000458 6.1e-12 75.5 232 30.6
arahy.Tifrunner.gnm1.ann1.QXR65D Arachis hypogaea HOM05D000584 ORTHO05D000458 8.0e-12 75.1 177 39.5
arahy.Tifrunner.gnm1.ann1.U5NVVR Arachis hypogaea HOM05D000584 ORTHO05D000458 8.0e-12 75.1 177 39.5
SGA_v2.0_scaffold57G20257 Striga asiatica HOM05D000584 ORTHO05D000458 1.0e-11 74.7 239 31.0
MELO3C006603.2 Cucumis melo HOM05D000584 ORTHO05D000458 2.3e-11 73.6 242 30.2
GSVIVG01021970001 Vitis vinifera HOM05D000584 ORTHO05D000458 2.3e-11 73.6 244 30.3
CsaV3_3G014090 Cucumis sativus L. HOM05D000584 ORTHO05D000458 3.0e-11 73.2 242 30.2
COL.COLO4_13936 Corchorus olitorius HOM05D000584 ORTHO05D000458 5.2e-11 72.4 219 32.4
Actinidia19820 Actinidia chinensis HOM05D000584 ORTHO05D000458 6.7e-11 72.0 173 32.4
MD13G1174400 Malus domestica HOM05D000584 ORTHO05D000458 6.7e-11 72.0 237 30.0
Nn4g26040 Nelumbo nucifera HOM05D000584 ORTHO05D000458 1.2e-10 71.2 191 34.0
MD16G1175900 Malus domestica HOM05D000584 ORTHO05D000458 1.5e-10 70.9 218 29.8
Potri.010G031601 Populus trichocarpa HOM05D000584 ORTHO05D000458 2.0e-10 70.5 173 35.3
PGSC0003DMG400010653 Solanum tuberosum HOM05D000584 ORTHO05D000458 2.0e-10 70.5 241 30.7
Gohir.D13G169200 Gossypium hirsutum HOM05D000584 ORTHO05D000458 2.6e-10 70.1 256 29.7
Gorai.013G192700 Gossypium raimondii HOM05D000584 ORTHO05D000458 2.6e-10 70.1 256 30.1
Gohir.A13G166300 Gossypium hirsutum HOM05D000584 ORTHO05D000458 3.3e-10 69.7 258 29.1
Hund20610 Selenicereus undatus HOM05D000584 ORTHO05D000458 4.4e-10 69.3 178 33.1
PSO210G2116 Papaver somniferum HOM05D000584 ORTHO05D000458 9.7e-10 68.2 165 32.1
Sed0021310 Sechium edule HOM05D000584 ORTHO05D000458 1.3e-09 67.8 244 27.9
Aqoxy5G00620 Aquilegia oxysepala HOM05D000584 ORTHO05D000458 1.7e-09 67.4 148 37.2
PGR004G0065 Punica granatum HOM05D000584 ORTHO05D000458 1.7e-09 67.4 218 32.1
TWI36G1661 Tripterygium wilfordii HOM05D000584 ORTHO05D000458 2.2e-09 67.0 246 29.3
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.8e-09 66.6 239 28.9
MBI19_g04669_MAGBIO Magnolia biondii HOM05D000584 ORTHO05D000458 4.8e-09 65.9 192 30.7
SalBow2G1008 Salvia bowleyana HOM05D000584 ORTHO05D000458 1.1e-08 64.7 223 31.8
Sopen01g029650 Solanum pennellii HOM05D000584 ORTHO05D000458 1.1e-08 64.7 241 29.5
Ciclev10005219m.g Citrus clementina HOM05D000584 ORTHO05D000458 1.4e-08 64.3 241 27.4
Cfa006503 Carpinus fangiana HOM05D000092 ORTHO05D000042 3.1e-08 63.2 220 28.2
Solyc01g067720.4 Solanum lycopersicum HOM05D000584 ORTHO05D000458 3.1e-08 63.2 241 29.0
Lsat_1_v5_gn_5_37741 Lactuca sativa HOM05D000584 ORTHO05D000458 4.1e-08 62.8 205 30.2
CSS0008589 Camellia sinensis var. sinensis HOM05D000584 ORTHO05D000458 5.3e-08 62.4 200 32.0
Actinidia00054 Actinidia chinensis HOM05D000584 ORTHO05D000458 7.0e-08 62.0 162 34.0
TWI56G1204 Tripterygium wilfordii HOM05D000584 ORTHO05D000458 9.1e-08 61.6 268 26.1
Cpa.g.sc16.108 Carica papaya HOM05D000584 ORTHO05D000458 1.2e-07 61.2 245 28.6
Potri.013G031400 Populus trichocarpa HOM05D000584 ORTHO05D000458 1.2e-07 61.2 281 26.0
CsaV3_1G039440 Cucumis sativus L. HOM05D000584 ORTHO05D000458 1.6e-07 60.8 180 31.1
Manes.09G160000 Manihot esculenta HOM05D000584 ORTHO05D000458 2.0e-07 60.5 242 24.4
CAN.G223.6 Capsicum annuum HOM05D000584 ORTHO05D000458 2.7e-07 60.1 239 27.6
Sc13g0003640 Simmondsia chinensis HOM05D000584 ORTHO05D000458 2.7e-07 60.1 214 30.8
Lj9A675T38 Lonicera japonica HOM05D000584 ORTHO05D000458 5.9e-07 58.9 215 29.8
PSO170G4558 Papaver somniferum HOM05D000584 ORTHO05D000458 5.9e-07 58.9 176 31.8
Thecc.04G276400 Theobroma cacao HOM05D000584 ORTHO05D000458 7.7e-07 58.5 230 28.7
MELO3C015369.2 Cucumis melo HOM05D000584 ORTHO05D000458 1.0e-06 58.2 190 30.0
Manes.08G125700 Manihot esculenta HOM05D000584 ORTHO05D000458 1.3e-06 57.8 230 25.7
Sabra13G0030500 Salix brachista HOM05D000584 ORTHO05D000458 1.3e-06 57.8 269 26.0
vmacro05064 Vaccinium macrocarpon HOM05D000584 ORTHO05D000458 1.3e-06 57.8 221 27.1
Actinidia27725 Actinidia chinensis HOM05D000584 ORTHO05D000458 2.2e-06 57.0 193 27.5
VMungo0720G2005 Vigna mungo HOM05D001702 ORTHO05D001791 2.9e-06 56.6 64 43.8
MSTRG.10049 Avicennia marina HOM05D000584 ORTHO05D000458 3.8e-06 56.2 256 26.2
EL10Ac1g00577 Beta vulgaris HOM05D000584 ORTHO05D000458 3.8e-06 56.2 213 26.8
TAR633G1254 Trochodendron aralioides HOM05D000584 ORTHO05D000458 3.8e-06 56.2 210 27.6
Ciclev10001215m.g Citrus clementina HOM05D000584 ORTHO05D000458 5.0e-06 55.8 103 34.0
Peaxi162Scf00225g00522 Petunia axillaris HOM05D000584 ORTHO05D000458 5.0e-06 55.8 222 29.3
Thecc.08G136400 Theobroma cacao HOM05D000584 ORTHO05D000458 5.0e-06 55.8 59 57.6
ClCG03G016540 Citrullus lanatus HOM05D000584 ORTHO05D000458 6.5e-06 55.5 184 28.8
unitig_748.g8572 Utricularia gibba HOM05D000584 ORTHO05D000458 6.5e-06 55.5 231 27.7
Cc03_g02420 Coffea canephora HOM05D000584 ORTHO05D000458 8.5e-06 55.1 163 32.5
PSO210G2571 Papaver somniferum HOM05D000584 ORTHO05D000458 8.5e-06 55.1 57 49.1


User provided reference genes

Program Settings