Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 9.1e-212 740.0 367 100.0
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 9.1e-204 713.4 366 95.4
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.1e-180 635.2 358 86.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 5.9e-179 630.9 367 85.0
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 9.5e-169 597.0 361 82.0
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 7.3e-161 570.9 362 78.5
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.6e-160 569.7 363 75.5
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.6e-160 569.7 363 75.5
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 8.9e-159 563.9 361 75.6
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 7.5e-158 560.8 361 75.1
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-157 560.1 361 75.3
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.3e-157 560.1 361 74.0
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 6.4e-157 557.8 361 74.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.4e-156 556.6 361 73.7
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.6e-155 553.1 362 73.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-154 550.1 356 77.0
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 6.2e-152 541.2 357 74.5
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.0e-151 538.5 356 75.3
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 4.0e-151 538.5 357 74.5
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.8e-150 534.6 360 71.9
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 3.8e-149 531.9 359 70.8
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 4.9e-149 531.6 360 70.6
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.4e-148 530.0 360 71.4
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 9.2e-148 527.3 361 71.2
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 5.1e-146 521.5 357 69.5
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.1e-145 520.4 357 70.3
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.1e-145 520.4 355 70.4
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.9e-145 519.6 360 68.6
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.2e-144 516.9 357 70.3
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 2.8e-144 515.8 360 68.6
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 2.8e-144 515.8 360 69.4
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.8e-143 513.1 360 69.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.8e-143 513.1 357 67.8
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 2.4e-143 512.7 360 69.2
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 4.0e-143 511.9 357 67.8
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 4.4e-142 508.4 357 68.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 9.9e-142 507.3 365 68.5
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.3e-141 506.9 360 68.1
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.3e-141 506.9 358 69.8
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 4.9e-141 505.0 357 68.6
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.9e-140 503.1 362 67.1
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 5.4e-140 501.5 360 68.3
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 4.6e-139 498.4 366 65.3
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 6.0e-139 498.0 359 68.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 6.0e-139 498.0 337 73.0
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 7.8e-139 497.7 357 67.2
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 6.6e-138 494.6 358 66.8
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 8.7e-138 494.2 365 67.1
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.5e-137 493.4 358 66.8
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 4.3e-137 491.9 360 66.7
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 9.6e-137 490.7 358 65.6
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.6e-136 490.0 365 66.3
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.8e-136 489.2 358 65.6
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.8e-136 489.2 358 65.9
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 6.2e-136 488.0 358 66.5
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 6.2e-136 488.0 362 65.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 6.2e-136 488.0 362 65.5
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-135 487.3 358 65.4
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.1e-135 487.3 358 65.4
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 6.9e-135 484.6 356 65.7
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 9.0e-135 484.2 354 66.7
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.2e-134 483.8 359 65.7
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.0e-134 483.0 367 61.9
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 3.4e-134 482.3 358 65.1
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 7.6e-134 481.1 352 65.6
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 9.9e-134 480.7 328 70.7
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 9.9e-134 480.7 339 69.3
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 1.7e-133 479.9 357 65.8
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.7e-133 479.9 356 65.4
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 2.2e-133 479.6 362 64.6
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 2.9e-133 479.2 357 65.3
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 3.8e-133 478.8 355 64.2
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.9e-133 478.4 362 64.1
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 8.4e-133 477.6 348 67.8
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 5.4e-132 474.9 360 64.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 9.3e-132 474.2 355 63.7
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 3.5e-131 472.2 357 65.0
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.6e-131 471.9 357 63.3
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 4.6e-131 471.9 339 69.0
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 4.6e-131 471.9 356 63.5
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 3.0e-130 469.2 377 62.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 6.7e-130 468.0 358 63.4
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 3.3e-129 465.7 360 63.6
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.3e-128 463.8 338 66.0
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.8e-128 462.6 377 62.1
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 8.1e-128 461.1 369 62.3
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 1.2e-126 457.2 321 68.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.2e-125 453.0 310 69.7
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.4e-124 450.3 358 59.8
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.4e-124 449.5 338 64.2
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 5.5e-124 448.4 435 54.9
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 9.3e-124 447.6 357 59.9
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.8e-122 443.4 358 59.5
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 5.1e-122 441.8 352 61.1
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 9.6e-121 437.6 361 62.3
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.6e-120 436.8 359 63.2
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 5.3e-119 431.8 402 56.5
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 4.2e-116 422.2 421 54.4
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 5.5e-116 421.8 314 65.3
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.1e-112 409.8 293 67.2
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 7.6e-110 401.4 287 68.6
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.0e-106 391.0 288 66.0
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.1e-105 387.5 361 56.8
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 2.5e-105 386.3 274 69.0
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 7.4e-105 384.8 308 58.8
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 9.7e-105 384.4 358 53.9
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 3.1e-103 379.4 271 70.1
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 5.9e-102 375.2 305 63.0
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.2e-99 367.5 339 56.0
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 3.8e-93 345.9 327 56.6
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.4e-90 337.4 265 63.0
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 8.2e-88 328.2 355 48.5
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 8.2e-88 328.2 263 61.6
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.0e-86 323.6 256 60.9
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 2.2e-85 320.1 312 51.6
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 2.7e-78 296.6 360 51.1
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.2e-74 282.3 445 39.1
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-65 252.7 359 44.0
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-60 236.5 246 54.5
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 4.7e-59 232.6 175 69.1
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 7.5e-57 225.3 351 40.2
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.7e-56 223.0 240 53.8
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.5e-52 210.3 210 56.2
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-49 201.4 180 61.1
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 7.5e-49 198.7 244 48.8
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-48 197.6 180 60.0
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.6e-35 154.5 110 64.5
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 4.4e-25 119.8 123 51.2
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-21 108.2 201 37.8
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 2.9e-16 90.5 68 60.3
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.4e-15 88.2 64 60.9
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 9.3e-15 85.5 49 83.7
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 6.2e-11 72.8 203 28.1
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 7.6e-09 65.9 32 93.8
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.4e-07 60.8 88 39.8


User provided reference genes

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