Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G205500 Glycine max HOM05D002838 ORTHO05D002114 1.8e-154 549.3 287 100.0
Glyma.17G014700 Glycine max HOM05D002838 ORTHO05D002114 2.3e-61 240.0 289 52.9
VMungo1215G0908 Vigna mungo HOM05D002838 ORTHO05D002114 9.7e-60 234.6 290 51.0
Lj4g0005787 Lotus japonicus HOM05D002838 ORTHO05D002114 8.8e-53 211.5 290 48.6
Phvul.003G077800 Phaseolus vulgaris HOM05D002838 ORTHO05D002114 9.7e-52 208.0 262 50.0
Glyma.07G259600 Glycine max HOM05D002838 ORTHO05D002114 7.7e-49 198.4 289 48.1
Lalb_Chr12g0196101 Lupinus albus HOM05D002838 ORTHO05D002114 1.0e-45 188.0 291 47.1
Ca_21089_v3 Cicer arietinum L. HOM05D002838 ORTHO05D002114 5.2e-37 159.1 289 37.7
Ca_30197_v3 Cicer arietinum L. HOM05D002838 ORTHO05D002114 5.2e-37 159.1 289 37.7
QL05p073767 Quercus lobata HOM05D002838 ORTHO05D002114 2.8e-35 153.3 283 38.9
arahy.Tifrunner.gnm1.ann1.KDA1J3 Arachis hypogaea HOM05D002838 ORTHO05D002114 1.1e-34 151.4 302 38.4
QL05p073529 Quercus lobata HOM05D002838 ORTHO05D002114 5.9e-33 145.6 283 37.8
arahy.Tifrunner.gnm1.ann1.PW7H5Q Arachis hypogaea HOM05D002838 ORTHO05D002114 1.3e-32 144.4 303 38.9
Psat4g007400 Pisum sativum HOM05D002838 ORTHO05D002114 2.7e-30 136.7 272 39.7
TPR.G34769 Trifolium pratense HOM05D002838 ORTHO05D002114 2.7e-30 136.7 278 37.4
Medtr4g131990 Medicago truncatula HOM05D002838 ORTHO05D002114 4.0e-29 132.9 264 37.5
CiPaw.09G090500 Carya illinoinensis HOM05D002838 ORTHO05D002114 6.8e-29 132.1 283 34.6
Haze_06786 Corylus avellana HOM05D002838 ORTHO05D002114 9.8e-28 128.3 286 35.0
CiPaw.10G070000 Carya illinoinensis HOM05D002838 ORTHO05D002114 1.4e-26 124.4 289 34.9
Cfa000236 Carpinus fangiana HOM05D002838 ORTHO05D002114 1.0e-24 118.2 296 33.1
RcHm_v2.0_Chr5g0003501 Rosa chinensis HOM05D002838 ORTHO05D002114 8.6e-16 88.6 200 29.5
Dinv13882 Davidia involucrata HOM05D002838 ORTHO05D002114 2.1e-14 84.0 271 31.4
MD05G1343900 Malus domestica HOM05D002838 ORTHO05D002114 2.6e-12 77.0 205 32.2
Prupe.4G022600 Prunus persica HOM05D002838 ORTHO05D002114 2.4e-10 70.5 216 30.6
Ciclev10014916m.g Citrus clementina HOM05D002838 ORTHO05D002114 3.5e-09 66.6 211 27.5
RcHm_v2.0_Chr5g0003491 Rosa chinensis HOM05D002838 ORTHO05D002114 1.0e-08 65.1 227 26.4
FvH4_3g02310 Fragaria vesca HOM05D002838 ORTHO05D002114 8.6e-08 62.0 232 25.4
Atru.chr10.2205 Acer truncatum HOM05D002838 ORTHO05D002114 1.5e-07 61.2 130 30.0
FAN25G1270 Fragaria x ananassa HOM05D002838 ORTHO05D002114 1.9e-07 60.8 232 25.4
Gohir.A05G169400 Gossypium hirsutum HOM05D002838 ORTHO05D002114 1.2e-06 58.2 292 27.1
Gohir.D05G172600 Gossypium hirsutum HOM05D002838 ORTHO05D002114 6.2e-06 55.8 291 26.1


User provided reference genes

Program Settings