Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G193800 Glycine max HOM05D002974 ORTHO05D002992 7.6e-62 240.4 124 100.0
Glyma.15G232200 Glycine max HOM05D002974 ORTHO05D002992 1.1e-52 209.9 124 89.5
Phvul.011G203450 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.8e-39 166.0 125 81.6
Lj3g0024515 Lotus japonicus HOM05D002974 ORTHO05D002992 6.3e-24 114.4 128 60.9
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 8.2e-24 114.0 126 62.7
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 1.2e-22 110.2 131 60.3
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 1.2e-22 110.2 128 59.4
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 1.1e-15 87.0 125 51.2
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 1.4e-15 86.7 83 67.5
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 2.4e-15 85.9 129 51.9
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 3.1e-15 85.5 129 49.6
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 3.1e-15 85.5 127 49.6
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 5.9e-14 81.3 129 51.9
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 1.0e-13 80.5 125 48.0
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 2.2e-13 79.3 122 46.7
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.5e-12 76.6 132 44.7
Lalb_Chr21g0315251 Lupinus albus HOM05D002974 ORTHO05D002992 1.9e-12 76.3 123 48.8
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.2e-08 62.8 64 62.5
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 2.2e-08 62.8 64 62.5
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.7e-08 62.0 121 38.0
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 4.9e-08 61.6 121 45.5
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 4.9e-08 61.6 121 45.5
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.1e-07 60.5 45 73.3
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 1.4e-07 60.1 49 67.3
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 1.4e-07 60.1 121 44.6
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.4e-07 59.3 64 59.4
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 2.4e-07 59.3 120 40.8
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.4e-07 59.3 42 69.0
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.4e-07 59.3 63 58.7
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 3.1e-07 58.9 50 66.0
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 4.1e-07 58.5 43 74.4
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.4e-07 58.2 43 74.4
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 7.0e-07 57.8 67 56.7
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 7.0e-07 57.8 67 55.2
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 9.2e-07 57.4 51 64.7
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 9.2e-07 57.4 51 64.7
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 1.2e-06 57.0 47 61.7
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 1.6e-06 56.6 47 70.2
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 1.6e-06 56.6 125 42.4
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 2.0e-06 56.2 67 55.2
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 2.7e-06 55.8 58 53.4
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 2.7e-06 55.8 52 59.6
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.7e-06 55.8 109 39.4
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 3.5e-06 55.5 74 47.3
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.5e-06 55.5 110 38.2
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 4.5e-06 55.1 105 43.8
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 5.9e-06 54.7 48 58.3
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 7.7e-06 54.3 49 63.3
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 7.7e-06 54.3 33 81.8
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 7.7e-06 54.3 39 71.8


User provided reference genes

Program Settings