Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 2.0e-68 262.3 132 100.0
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 6.4e-67 257.3 132 98.5
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 7.8e-65 250.4 132 95.5
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 6.9e-53 210.7 135 77.8
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 1.5e-52 209.5 131 80.2
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 5.8e-52 207.6 131 80.2
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 7.9e-49 197.2 128 75.8
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 7.9e-49 197.2 128 75.8
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.3e-48 196.4 127 76.4
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 8.7e-48 193.7 128 76.6
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.5e-47 193.0 129 72.9
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 4.3e-47 191.4 127 74.8
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 4.3e-47 191.4 129 69.8
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 7.4e-47 190.7 129 70.5
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.3e-46 189.9 126 71.4
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.6e-46 189.5 131 71.8
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 1.6e-46 189.5 124 72.6
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.1e-46 189.1 130 71.5
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 2.1e-46 189.1 129 69.8
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.8e-46 188.7 129 72.1
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 2.8e-46 188.7 129 71.3
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 2.8e-46 188.7 129 71.3
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.8e-46 188.7 129 73.6
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 3.7e-46 188.3 129 69.0
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 4.8e-46 188.0 130 70.8
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 4.8e-46 188.0 129 71.3
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.2e-46 187.6 129 71.3
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 6.2e-46 187.6 130 70.8
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 6.2e-46 187.6 130 71.5
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.1e-45 186.8 129 69.8
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.1e-45 186.8 125 73.6
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 1.4e-45 186.4 129 70.5
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 1.8e-45 186.0 129 70.5
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.4e-45 185.7 129 70.5
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 3.1e-45 185.3 129 71.3
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 4.0e-45 184.9 130 70.8
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 4.0e-45 184.9 129 70.5
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 5.3e-45 184.5 127 68.5
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 9.0e-45 183.7 129 69.0
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 2.0e-44 182.6 128 70.3
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.0e-44 182.6 129 72.9
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 2.6e-44 182.2 129 69.8
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.6e-44 182.2 127 70.9
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 2.6e-44 182.2 129 69.8
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.4e-44 181.8 128 68.8
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 3.4e-44 181.8 129 69.0
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 4.5e-44 181.4 128 68.0
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.5e-44 181.4 131 67.9
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.5e-44 181.4 131 67.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 5.8e-44 181.0 129 69.0
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 7.6e-44 180.6 128 68.0
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 7.6e-44 180.6 128 68.0
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 7.6e-44 180.6 128 68.0
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 7.6e-44 180.6 128 68.0
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.0e-43 180.3 130 69.2
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 1.0e-43 180.3 129 70.5
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.0e-43 180.3 127 69.3
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.0e-43 180.3 137 66.4
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.0e-43 180.3 129 67.4
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.3e-43 179.9 131 69.5
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.3e-43 179.9 129 67.4
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.3e-43 179.9 129 67.4
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 1.3e-43 179.9 128 69.5
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.3e-43 179.9 128 68.0
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 1.7e-43 179.5 129 69.0
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.7e-43 179.5 128 68.0
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 2.2e-43 179.1 129 65.9
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 2.2e-43 179.1 130 66.2
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 2.9e-43 178.7 128 66.4
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.9e-43 178.7 129 67.4
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.9e-43 178.7 129 67.4
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 3.8e-43 178.3 129 66.7
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 3.8e-43 178.3 128 70.3
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 4.9e-43 177.9 128 65.6
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 4.9e-43 177.9 128 65.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 4.9e-43 177.9 123 69.9
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 4.9e-43 177.9 128 67.2
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 4.9e-43 177.9 129 67.4
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 4.9e-43 177.9 130 66.2
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 6.5e-43 177.6 127 66.9
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 8.4e-43 177.2 132 65.9
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 1.4e-42 176.4 129 66.7
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 1.4e-42 176.4 130 66.9
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.9e-42 176.0 125 68.8
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 3.2e-42 175.3 127 66.1
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 3.2e-42 175.3 129 65.9
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 4.2e-42 174.9 130 66.9
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 4.2e-42 174.9 127 66.1
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 5.5e-42 174.5 128 66.4
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.5e-42 174.5 127 66.1
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 5.5e-42 174.5 131 64.9
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 7.1e-42 174.1 137 65.0
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 7.1e-42 174.1 137 64.2
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 9.3e-42 173.7 137 65.0
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 2.1e-41 172.6 138 63.0
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 4.6e-41 171.4 135 64.4
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 4.6e-41 171.4 141 61.7
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 4.6e-41 171.4 135 64.4
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 6.0e-41 171.0 125 65.6
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 7.9e-41 170.6 127 66.9
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.3e-40 169.9 129 63.6
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.9e-40 168.3 154 57.1
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 6.7e-40 167.5 130 62.3
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 8.7e-40 167.2 131 62.6
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 8.7e-40 167.2 134 60.4
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.3e-38 163.3 130 62.3
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 6.3e-38 161.0 119 65.5
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 3.1e-37 158.7 129 63.6
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.0e-36 156.0 127 65.4
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 1.3e-35 153.3 131 58.8
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 2.9e-35 152.1 105 64.8
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 9.3e-34 147.1 170 47.1
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 3.3e-31 138.7 131 58.0
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 4.3e-31 138.3 126 57.9
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 5.7e-31 137.9 129 53.5
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 9.7e-31 137.1 123 55.3
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 4.8e-30 134.8 129 52.7
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 2.4e-29 132.5 95 69.5
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.0e-28 129.4 93 67.7
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 6.5e-27 124.4 136 49.3
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.9e-26 122.9 78 79.5
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.0e-20 102.8 72 66.7
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 4.5e-20 101.7 68 70.6
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.0e-19 100.5 71 67.6
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 2.2e-19 99.4 67 68.7
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 3.8e-19 98.6 68 66.2
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 8.5e-19 97.4 71 66.2
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.9e-18 96.3 67 64.2
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 5.5e-18 94.7 66 71.2
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.2e-17 93.6 68 63.2
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 1.6e-17 93.2 62 72.6
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.6e-17 92.0 62 72.6
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.6e-17 92.0 62 72.6
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.6e-17 92.0 67 65.7
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.0e-16 89.0 72 55.6
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.9e-16 88.6 71 60.6
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 8.8e-16 87.4 69 60.9
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 1.1e-15 87.0 62 67.7
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 3.3e-15 85.5 118 36.4
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.4e-13 79.3 56 67.9
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.6e-12 75.9 53 66.0
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 4.5e-12 75.1 56 67.9
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 8.5e-11 70.9 73 47.9
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 8.5e-11 70.9 111 35.1
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.1e-10 70.5 72 41.7
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 1.9e-10 69.7 89 40.4
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 8.0e-09 64.3 102 34.3
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.2e-06 56.2 72 31.9
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.7e-06 55.5 48 54.2


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