Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.0e-193 679.9 335 100.0
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 3.0e-169 598.6 337 87.5
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.2e-165 586.6 334 85.3
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 7.6e-165 583.9 325 87.7
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 4.2e-163 578.2 339 84.1
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 9.3e-163 577.0 329 85.7
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.0e-161 573.5 337 83.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.1e-160 570.1 335 84.8
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.5e-157 558.1 344 81.7
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.5e-157 558.1 344 81.4
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 6.7e-153 544.3 333 78.7
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.1e-152 543.5 326 81.0
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.5e-152 543.1 327 80.1
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 1.3e-151 540.0 325 79.4
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-151 540.0 329 80.2
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.8e-151 538.1 322 80.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 6.2e-151 537.7 335 78.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 6.2e-151 537.7 335 78.8
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.1e-150 537.0 335 77.6
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 1.4e-150 536.6 316 81.6
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.8e-150 536.2 335 78.8
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 6.9e-150 534.3 335 77.9
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.0e-150 533.9 321 79.8
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.5e-149 533.1 321 80.4
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.7e-148 529.6 325 79.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.7e-148 529.6 326 79.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.7e-148 529.6 328 78.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.7e-148 529.6 329 78.4
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.2e-148 529.3 326 79.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.9e-148 528.9 328 78.7
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 4.9e-148 528.1 326 77.9
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 6.5e-148 527.7 325 78.8
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.9e-147 526.2 326 77.9
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.2e-147 525.4 324 78.4
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 7.1e-147 524.2 328 76.8
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.2e-146 523.5 326 78.8
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 3.5e-146 521.9 335 76.7
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 4.6e-146 521.5 371 71.2
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 4.6e-146 521.5 314 80.6
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.0e-145 520.4 329 76.6
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.0e-145 518.8 324 78.1
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.9e-145 518.5 370 71.1
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.5e-144 516.5 331 75.5
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.5e-144 515.8 325 78.2
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 5.7e-144 514.6 328 76.2
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.4e-144 514.2 337 75.1
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 9.6e-144 513.8 332 77.7
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.1e-143 512.7 333 75.7
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.8e-143 512.3 327 75.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.8e-143 512.3 316 77.5
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.8e-143 511.5 327 75.5
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.1e-142 508.8 325 77.2
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.0e-141 506.1 332 75.0
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 2.6e-141 505.8 333 75.1
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.6e-141 505.8 336 74.7
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 7.6e-141 504.2 326 76.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.3e-140 503.4 304 79.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.2e-140 502.7 326 75.5
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 2.2e-140 502.7 326 76.4
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 2.9e-140 502.3 327 74.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 8.5e-140 500.7 325 75.4
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.1e-139 500.4 321 75.4
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.9e-139 499.6 300 80.7
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.2e-139 498.8 324 74.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 5.5e-139 498.0 324 74.7
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.5e-139 498.0 350 70.6
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 5.5e-139 498.0 341 73.6
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.6e-138 496.5 324 74.4
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.7e-138 495.7 329 73.3
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.3e-137 493.4 313 78.0
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.3e-137 492.7 322 74.2
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.6e-135 486.5 324 73.5
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.6e-135 486.5 305 77.7
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 8.2e-135 484.2 326 73.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.4e-131 473.4 314 72.9
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 7.2e-131 471.1 369 66.1
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 3.6e-130 468.8 295 77.3
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.6e-130 468.8 322 71.1
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.0e-129 465.7 363 65.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 3.0e-129 465.7 333 70.3
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 5.1e-129 464.9 284 78.2
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 2.6e-128 462.6 276 83.3
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.3e-128 462.2 343 67.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.3e-128 462.2 343 67.9
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 3.7e-127 458.8 305 76.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.4e-126 456.8 299 74.6
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.8e-126 456.4 344 68.0
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 9.1e-126 454.1 326 69.0
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.5e-125 453.4 278 78.1
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.7e-124 449.9 325 71.4
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.1e-123 447.2 267 78.7
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.2e-123 445.3 388 61.3
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.8e-121 439.9 323 66.6
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.8e-119 432.6 288 73.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.1e-118 430.6 286 74.1
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.6e-117 426.0 299 69.2
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.9e-116 422.5 381 60.9
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 4.7e-114 415.2 307 64.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.0e-113 414.1 259 77.6
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 6.7e-113 411.4 324 64.8
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 8.8e-113 411.0 319 61.4
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 8.2e-111 404.4 292 67.1
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.1e-110 404.1 324 60.8
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.7e-108 396.7 288 68.4
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 3.2e-107 392.5 306 64.4
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.3e-103 380.6 322 58.4
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.1e-102 375.6 234 79.1
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 2.0e-101 373.2 321 59.8
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 8.6e-100 367.9 272 68.0
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.7e-95 352.4 314 54.5
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.8e-94 350.1 288 65.3
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.3e-91 339.0 225 70.7
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 8.9e-89 331.3 244 66.4
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 7.5e-88 328.2 233 67.4
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.6e-84 315.1 224 68.3
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.9e-79 299.7 225 68.4
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.8e-73 280.4 368 43.2
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 9.2e-70 268.1 166 83.7
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.1e-51 208.0 143 72.0
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.1e-51 208.0 329 38.9
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.3e-51 206.5 176 60.8
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 6.7e-44 182.2 129 66.7
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 4.3e-43 179.5 107 72.9
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.2e-37 161.4 282 36.2
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-28 131.3 97 66.0
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.3e-20 104.0 82 59.8
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-16 91.7 55 74.5
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 7.7e-16 89.0 71 60.6
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.3e-12 77.4 70 62.9


User provided reference genes

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