Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 2.8e-76 288.5 144 100.0
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 2.1e-71 272.3 144 95.1
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 2.0e-61 239.2 141 88.7
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.7e-55 218.0 136 84.6
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 6.2e-47 191.0 145 71.7
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 1.8e-46 189.5 144 70.8
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 1.5e-45 186.4 145 70.3
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 2.6e-45 185.7 146 70.5
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 4.4e-45 184.9 146 69.9
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 4.4e-45 184.9 146 69.2
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 7.5e-45 184.1 149 69.8
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 7.5e-45 184.1 144 69.4
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 2.2e-44 182.6 144 66.7
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 1.9e-43 179.5 145 68.3
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 5.0e-41 171.4 127 69.3
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 7.3e-40 167.5 143 63.6
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 2.2e-36 156.0 148 62.8
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 4.9e-36 154.8 133 59.4
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 4.9e-36 154.8 144 60.4
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 6.4e-36 154.5 145 57.2
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 2.4e-35 152.5 141 57.4
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 3.2e-35 152.1 144 62.5
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 4.1e-35 151.8 136 58.1
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 1.2e-34 150.2 142 59.2
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 3.5e-34 148.7 143 55.2
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 7.8e-34 147.5 141 56.0
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 3.0e-33 145.6 137 57.7
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 8.6e-33 144.1 142 56.3
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 1.9e-32 142.9 143 55.2
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.9e-32 142.9 141 55.3
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 3.3e-32 142.1 143 54.5
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 5.6e-32 141.4 141 52.5
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 5.6e-32 141.4 141 55.3
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 2.8e-31 139.0 137 54.7
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 6.2e-31 137.9 142 55.6
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.4e-30 136.7 146 52.1
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 1.5e-29 133.3 139 51.1
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.5e-29 133.3 148 51.4
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.5e-29 133.3 141 52.5
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 2.0e-29 132.9 145 52.4
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.0e-29 132.9 143 51.7
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 3.4e-29 132.1 141 51.8
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.3e-28 130.2 143 51.0
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.2e-28 129.4 139 51.8
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 2.2e-28 129.4 136 52.9
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 3.8e-28 128.6 145 50.3
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.9e-28 128.3 149 51.0
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 4.9e-28 128.3 149 51.0
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.4e-28 127.9 149 51.0
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 1.4e-27 126.7 143 50.3
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 2.7e-26 122.5 146 45.9
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 3.5e-26 122.1 141 47.5
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 6.0e-26 121.3 136 51.5
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 7.8e-26 120.9 132 53.0
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 8.7e-25 117.5 141 45.4
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 3.3e-24 115.5 143 48.3
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 7.3e-24 114.4 143 44.8
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 2.1e-23 112.8 147 47.6
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 4.7e-23 111.7 141 46.8
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 8.1e-23 110.9 150 47.3
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 8.1e-23 110.9 123 50.4
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 1.8e-22 109.8 141 44.7
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.4e-22 109.4 150 47.3
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 1.2e-21 107.1 126 49.2
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.5e-21 106.7 140 44.3
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 2.0e-21 106.3 142 44.4
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 2.6e-21 105.9 144 43.8
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 4.4e-21 105.1 133 44.4
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 1.1e-19 100.5 102 58.8
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 3.2e-19 99.0 150 44.0
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 4.2e-19 98.6 86 64.0
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 5.4e-19 98.2 138 42.8
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 1.6e-18 96.7 148 42.6
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 2.7e-18 95.9 142 40.8
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 2.7e-18 95.9 146 39.0
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 3.5e-18 95.5 124 46.0
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 4.6e-18 95.1 122 47.5
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 7.8e-18 94.4 146 39.7
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.7e-17 93.2 129 44.2
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 3.0e-17 92.4 142 43.0
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 3.0e-17 92.4 138 42.8
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 3.9e-17 92.0 127 47.2
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 9.6e-16 87.4 119 50.4
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.1e-15 86.3 129 45.0
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 8.1e-15 84.3 126 41.3
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 3.1e-14 82.4 140 39.3
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 5.3e-14 81.6 95 47.4
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 9.0e-14 80.9 126 40.5
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.5e-13 80.1 78 55.1
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 3.8e-12 75.5 142 38.0
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 3.2e-11 72.4 54 70.4
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 9.3e-11 70.9 131 38.2
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 2.3e-09 66.2 86 43.0
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 6.7e-09 64.7 76 44.7
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.5e-08 63.5 67 55.2
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 7.4e-08 61.2 68 47.1
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 4.8e-07 58.5 69 49.3
Mapoly0541s0001 Marchantia polymorpha HOM05D007507 ORTHO05D009420 1.1e-06 57.4 75 49.3
Hund21209 Selenicereus undatus HOM05D007507 ORTHO05D009420 1.1e-06 57.4 68 48.5
Lsat_1_v5_gn_8_75920 Lactuca sativa HOM05D003527 ORTHO05D004099 2.4e-06 56.2 140 33.6
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 3.1e-06 55.8 118 34.7
Glyma.08G358400 Glycine max HOM05D003527 ORTHO05D004099 4.0e-06 55.5 88 40.9
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 4.0e-06 55.5 123 35.8
TWI79G0031 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 4.0e-06 55.5 108 38.0
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 9.0e-06 54.3 113 37.2
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 9.0e-06 54.3 113 36.3


User provided reference genes

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