Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 3.8e-67 258.1 134 100.0
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 3.0e-64 248.4 134 95.5
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.1e-61 240.0 134 91.0
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.6e-57 226.1 134 85.8
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 8.0e-57 223.8 134 83.6
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.2e-55 219.9 134 82.8
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 1.5e-55 219.5 134 81.3
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 2.6e-55 218.8 134 82.8
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 5.7e-55 217.6 134 82.1
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 9.8e-55 216.9 134 80.6
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 9.8e-55 216.9 135 83.0
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 1.7e-54 216.1 133 79.7
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 2.2e-54 215.7 134 82.8
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 2.8e-54 215.3 134 80.6
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 4.8e-54 214.5 134 79.9
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 8.3e-54 213.8 134 82.8
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 3.1e-53 211.8 134 78.4
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 3.1e-53 211.8 134 79.1
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 3.1e-53 211.8 134 76.1
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 4.1e-53 211.5 134 77.6
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 5.4e-53 211.1 134 77.6
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 2.0e-52 209.1 134 79.1
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 2.7e-52 208.8 134 79.1
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 2.7e-52 208.8 134 75.4
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 3.5e-52 208.4 132 79.5
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 4.5e-52 208.0 134 75.4
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 4.5e-52 208.0 134 76.9
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 4.5e-52 208.0 134 76.9
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 7.7e-52 207.2 135 79.3
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 1.0e-51 206.8 134 75.4
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.0e-51 206.8 134 76.9
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 1.0e-51 206.8 134 76.1
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.3e-51 206.5 134 76.1
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 2.2e-51 205.7 134 79.1
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 2.2e-51 205.7 134 74.6
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 2.9e-51 205.3 135 77.8
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 2.9e-51 205.3 134 76.9
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 6.5e-51 204.1 134 73.9
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 6.5e-51 204.1 134 76.1
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 6.5e-51 204.1 134 76.9
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 8.5e-51 203.8 134 74.6
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 8.5e-51 203.8 134 76.1
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 8.5e-51 203.8 134 76.1
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.1e-50 203.4 134 74.6
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.5e-50 203.0 134 73.9
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.5e-50 203.0 134 74.6
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.9e-50 202.6 132 75.0
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 1.9e-50 202.6 134 77.6
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 1.9e-50 202.6 134 74.6
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.9e-50 202.6 134 74.6
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 4.2e-50 201.4 134 74.6
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 9.4e-50 200.3 135 74.1
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 9.4e-50 200.3 134 75.4
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 9.4e-50 200.3 134 74.6
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 1.6e-49 199.5 134 73.9
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.6e-49 199.5 134 76.9
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 6.1e-49 197.6 134 74.6
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 6.1e-49 197.6 134 74.6
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 8.0e-49 197.2 134 73.1
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 8.0e-49 197.2 134 79.9
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.0e-48 196.8 134 80.6
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 1.0e-48 196.8 135 74.1
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.4e-48 196.4 134 75.4
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.4e-48 196.4 134 75.4
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.4e-48 196.4 134 75.4
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.8e-48 196.1 134 73.1
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 2.3e-48 195.7 120 82.5
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.0e-48 195.3 132 72.0
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 5.2e-48 194.5 134 73.1
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 5.2e-48 194.5 134 72.4
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 6.8e-48 194.1 134 72.4
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.2e-47 193.4 134 73.9
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.5e-47 193.0 135 70.4
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.5e-47 193.0 135 70.4
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.5e-47 193.0 135 70.4
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.5e-47 193.0 135 70.4
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.0e-47 192.6 134 70.1
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 2.6e-47 192.2 134 72.4
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 4.4e-47 191.4 135 69.6
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 5.7e-47 191.0 135 69.6
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 7.5e-47 190.7 134 71.6
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 9.8e-47 190.3 135 69.6
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 9.8e-47 190.3 134 71.6
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 9.8e-47 190.3 134 71.6
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 3.7e-46 188.3 135 68.1
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 3.7e-46 188.3 135 68.9
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 6.3e-46 187.6 134 70.9
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.1e-45 186.8 135 67.4
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.4e-45 186.4 134 75.4
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.8e-45 186.0 134 70.1
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 1.8e-45 186.0 135 67.4
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.4e-45 185.7 134 69.4
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 3.1e-45 185.3 134 74.6
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.1e-45 184.9 151 66.9
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 4.1e-45 184.9 134 67.2
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 9.1e-45 183.7 134 67.9
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 2.0e-44 182.6 134 67.2
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 5.9e-44 181.0 134 67.9
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 5.9e-44 181.0 134 66.4
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 6.6e-43 177.6 134 67.9
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 6.6e-43 177.6 138 68.8
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.5e-42 176.4 135 67.4
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.3e-42 175.3 136 67.6
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.3e-42 175.3 136 67.6
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.2e-41 173.3 134 66.4
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 1.6e-41 172.9 136 65.4
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 2.1e-41 172.6 105 83.8
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 6.1e-41 171.0 134 63.4
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 8.0e-41 170.6 132 69.7
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.0e-40 170.2 171 56.1
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 6.8e-40 167.5 132 63.6
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.5e-39 166.4 134 62.7
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 9.8e-39 163.7 105 76.2
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 6.4e-38 161.0 134 63.4
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 1.4e-37 159.8 104 76.0
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 3.2e-37 158.7 134 62.7
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 4.1e-37 158.3 136 64.0
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 7.0e-37 157.5 105 73.3
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.6e-36 156.4 111 68.5
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.0e-36 156.0 107 72.0
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.0e-36 156.0 107 72.0
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.9e-36 154.5 134 58.2
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.7e-35 152.9 136 61.8
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 8.6e-35 150.6 134 61.9
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 3.6e-33 145.2 105 66.7
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.0e-31 139.4 100 73.0
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.7e-30 136.3 136 53.7
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 6.4e-30 134.4 137 54.0
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.9e-29 132.9 125 53.6
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.5e-28 128.6 91 71.4
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.0e-27 127.1 87 69.0
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 4.7e-25 118.2 152 43.4
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 5.2e-24 114.8 89 66.3
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 2.2e-22 109.4 88 62.5
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 4.6e-20 101.7 135 42.2
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 4.7e-17 91.7 100 56.0
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 6.2e-17 91.3 82 62.2
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.1e-16 90.5 105 43.8
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 3.4e-15 85.5 107 43.9
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 4.4e-15 85.1 132 34.1
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 7.8e-12 74.3 57 64.9
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 1.0e-11 73.9 140 34.3
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 1.5e-10 70.1 134 29.9
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 3.1e-08 62.4 35 80.0


User provided reference genes

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