Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 8.0e-70 266.9 130 100.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 6.8e-61 237.3 128 89.1
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.6e-57 226.1 118 91.5
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 4.7e-54 214.5 130 80.0
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.0e-53 213.4 130 79.2
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 2.8e-51 205.3 133 75.2
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.8e-51 205.3 131 75.6
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.4e-50 203.0 129 76.7
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 4.1e-50 201.4 127 77.2
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 4.1e-50 201.4 122 78.7
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 5.4e-50 201.1 122 78.7
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 5.4e-50 201.1 130 75.4
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 9.2e-50 200.3 129 75.2
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 9.2e-50 200.3 127 76.4
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 9.2e-50 200.3 126 75.4
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 9.2e-50 200.3 127 76.4
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 1.2e-49 199.9 125 76.8
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.6e-49 199.5 126 74.6
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.0e-49 199.1 134 72.4
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 2.0e-49 199.1 126 75.4
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.7e-49 198.7 130 74.6
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 3.5e-49 198.4 126 76.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.5e-49 198.4 122 77.9
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 4.5e-49 198.0 126 76.2
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 4.5e-49 198.0 139 70.5
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 5.9e-49 197.6 126 74.6
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 7.8e-49 197.2 128 75.8
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 7.8e-49 197.2 127 75.6
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 7.8e-49 197.2 122 76.2
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 1.0e-48 196.8 122 77.0
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.3e-48 196.4 126 73.8
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.3e-48 196.4 122 77.0
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 2.9e-48 195.3 127 74.8
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 2.9e-48 195.3 122 77.0
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 2.9e-48 195.3 122 77.0
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 3.9e-48 194.9 126 75.4
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 3.9e-48 194.9 128 72.7
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 5.0e-48 194.5 134 71.6
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.0e-48 194.5 122 77.0
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 5.0e-48 194.5 122 75.4
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 5.0e-48 194.5 130 73.8
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 5.0e-48 194.5 122 77.9
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 5.0e-48 194.5 122 74.6
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 6.6e-48 194.1 122 75.4
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 6.6e-48 194.1 122 76.2
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 8.6e-48 193.7 130 72.3
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 1.1e-47 193.4 122 76.2
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.5e-47 193.0 122 76.2
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.5e-47 193.0 134 70.9
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 1.5e-47 193.0 122 76.2
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.5e-47 193.0 122 75.4
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.9e-47 192.6 122 75.4
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 3.3e-47 191.8 122 73.8
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 3.3e-47 191.8 122 75.4
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 4.3e-47 191.4 122 73.8
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 4.3e-47 191.4 129 74.4
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 7.3e-47 190.7 127 73.2
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 7.3e-47 190.7 122 77.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 1.2e-46 189.9 120 75.8
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.6e-46 189.5 120 75.8
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.6e-46 189.5 122 74.6
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.6e-46 189.5 127 70.9
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 2.8e-46 188.7 122 76.2
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 3.6e-46 188.3 122 74.6
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 3.6e-46 188.3 134 68.7
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 3.6e-46 188.3 134 66.4
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 3.6e-46 188.3 122 74.6
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 3.6e-46 188.3 122 75.4
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 4.7e-46 188.0 120 75.0
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 4.7e-46 188.0 122 73.8
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 6.1e-46 187.6 122 73.0
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 8.0e-46 187.2 134 67.2
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 8.0e-46 187.2 134 66.4
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 8.0e-46 187.2 122 73.0
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.0e-45 186.8 131 71.0
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.4e-45 186.4 132 67.4
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.4e-45 186.4 122 72.1
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 1.8e-45 186.0 122 71.3
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 2.3e-45 185.7 134 66.4
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 2.3e-45 185.7 134 66.4
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 4.0e-45 184.9 122 71.3
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 4.0e-45 184.9 129 68.2
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 5.2e-45 184.5 134 66.4
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 6.8e-45 184.1 122 69.7
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 6.8e-45 184.1 122 71.3
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 6.8e-45 184.1 122 73.8
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 8.9e-45 183.7 122 70.5
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 8.9e-45 183.7 134 64.9
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.2e-44 183.3 120 73.3
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.0e-44 182.6 122 71.3
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 3.4e-44 181.8 122 69.7
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 3.4e-44 181.8 121 70.2
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.3e-43 179.9 120 72.5
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.2e-43 179.1 127 65.4
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 5.4e-42 174.5 124 64.5
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 9.2e-42 173.7 162 55.6
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.6e-41 172.9 174 55.7
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 6.0e-41 171.0 122 68.0
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.3e-40 169.1 121 66.1
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 5.0e-40 167.9 173 52.0
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 2.5e-39 165.6 122 69.7
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 2.1e-38 162.5 134 61.2
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.7e-35 151.8 99 72.7
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.6e-30 136.3 106 62.3
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.6e-30 136.3 84 76.2
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 4.0e-29 131.7 78 79.5
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.5e-28 129.8 67 91.0
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 4.4e-28 128.3 78 79.5
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 7.1e-26 120.9 76 76.3
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.6e-22 109.8 115 53.0
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 2.4e-21 105.9 121 50.4
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 9.9e-20 100.5 81 60.5
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 1.5e-15 86.7 121 42.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.1e-14 82.8 51 78.4
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.1e-14 82.8 135 43.7
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-13 80.5 42 90.5
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.6e-12 75.9 39 89.7
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.6e-12 75.9 39 89.7
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 5.8e-12 74.7 45 75.6
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.4e-10 69.3 110 43.6
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 1.6e-06 56.6 37 67.6


User provided reference genes

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