Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.1e-110 403.3 195 100.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 4.2e-107 391.3 195 96.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 2.8e-103 378.6 195 93.3
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.4e-94 349.7 195 87.2
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 4.1e-94 348.2 195 87.2
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 7.0e-94 347.4 196 86.7
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 2.6e-88 328.9 196 81.6
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 3.5e-85 318.5 183 84.2
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 3.2e-83 312.0 200 79.5
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 8.8e-81 303.9 200 78.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.5e-75 285.8 157 87.9
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 3.0e-73 278.9 195 71.8
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 3.0e-73 278.9 195 70.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 8.8e-73 277.3 195 70.8
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 8.8e-73 277.3 195 70.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 8.8e-73 277.3 195 70.8
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 2.6e-72 275.8 195 70.8
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.2e-71 272.7 195 68.2
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 4.9e-71 271.6 199 70.4
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.4e-70 269.2 195 67.7
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 3.1e-70 268.9 195 69.2
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 5.4e-70 268.1 201 68.2
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 5.4e-70 268.1 195 68.2
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 5.4e-70 268.1 195 69.2
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 1.6e-69 266.5 186 71.5
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 5.9e-69 264.6 195 68.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 5.9e-69 264.6 195 69.2
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.3e-68 263.5 195 67.7
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.7e-68 263.1 195 65.6
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 2.3e-68 262.7 195 68.2
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 3.8e-68 261.9 195 67.7
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 5.0e-68 261.5 196 69.4
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 5.0e-68 261.5 195 67.2
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.5e-67 260.0 195 67.7
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.9e-67 259.6 195 67.7
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.9e-67 259.6 196 67.3
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 7.3e-67 257.7 196 67.9
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.6e-66 256.5 195 68.7
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 3.6e-66 255.4 195 67.2
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 4.7e-66 255.0 196 65.3
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.4e-65 253.4 195 66.2
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 2.3e-65 252.7 186 66.7
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 5.2e-65 251.5 195 64.6
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 8.9e-65 250.8 196 69.4
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.5e-64 250.0 195 64.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.0e-64 249.6 195 64.6
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 9.8e-64 247.3 186 67.7
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.3e-63 246.9 197 67.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.3e-63 246.9 194 67.0
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.7e-63 246.5 196 62.2
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.7e-63 245.4 197 63.5
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 3.7e-63 245.4 195 64.1
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.9e-63 245.0 186 67.2
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.4e-63 244.6 186 67.2
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 6.4e-63 244.6 197 63.5
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 6.4e-63 244.6 257 52.9
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 8.3e-63 244.2 195 61.5
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.8e-62 243.0 189 63.5
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 4.1e-62 241.9 199 62.8
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 2.0e-61 239.6 186 64.0
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.7e-61 239.2 196 64.3
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.7e-61 239.2 196 64.3
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.6e-61 238.4 195 63.6
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.0e-60 237.3 179 65.4
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 3.0e-60 235.7 198 62.6
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 1.9e-59 233.0 189 63.0
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 5.6e-59 231.5 195 59.5
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.2e-58 230.3 197 64.0
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.6e-58 229.9 197 62.4
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.1e-58 229.6 198 60.1
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 3.6e-58 228.8 198 59.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 3.6e-58 228.8 188 62.2
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.4e-57 226.9 196 63.8
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.0e-57 225.3 229 55.0
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 4.0e-57 225.3 195 59.0
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 4.0e-57 225.3 195 59.0
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 4.0e-57 225.3 195 62.1
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 6.8e-57 224.6 195 62.1
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.2e-56 223.8 194 64.4
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.5e-56 223.4 194 62.4
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.5e-56 223.4 194 62.4
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.4e-56 221.9 194 61.9
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.8e-56 221.5 194 61.9
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.7e-55 219.9 195 58.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.9e-55 219.2 195 57.4
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 3.7e-55 218.8 189 58.7
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 4.9e-55 218.4 193 57.5
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.4e-54 216.9 198 59.1
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 5.4e-54 214.9 153 68.6
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 5.4e-54 214.9 164 64.6
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 7.0e-54 214.5 165 66.7
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 9.2e-54 214.2 195 58.5
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.9e-51 206.5 147 69.4
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 5.6e-51 204.9 188 57.4
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-47 193.7 156 62.8
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.2e-47 193.0 150 65.3
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 2.1e-45 186.4 186 54.3
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 6.6e-44 181.4 166 57.2
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 6.6e-44 181.4 166 57.8
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 6.6e-44 181.4 152 61.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.0e-36 157.5 197 47.2
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 3.3e-35 152.5 192 48.4
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 5.2e-33 145.2 136 52.9
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 2.1e-29 133.3 194 43.3
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.3e-26 124.0 166 39.8
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 4.8e-26 122.1 87 66.7
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.1e-26 121.3 109 59.6
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 8.1e-26 121.3 184 41.8
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.4e-25 120.6 89 67.4
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 2.0e-24 116.7 98 59.2
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.0e-24 116.7 102 57.8
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.5e-19 100.5 87 62.1
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 7.4e-19 98.2 134 38.1
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 9.6e-19 97.8 130 36.2
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.1e-17 94.4 75 60.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.8e-16 88.6 66 71.2
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.3e-11 72.8 107 42.1
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 4.5e-08 62.4 50 70.0
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 4.5e-08 62.4 49 67.3
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 4.2e-06 55.8 41 61.0


User provided reference genes

Program Settings