Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 3.6e-180 634.8 323 100.0
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 8.1e-164 580.5 324 90.7
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 3.6e-156 555.1 323 86.7
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.4e-154 548.5 324 85.2
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.2e-152 541.6 322 84.5
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 6.0e-151 537.7 324 83.6
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 1.8e-150 536.2 323 83.9
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 1.9e-149 532.7 324 82.7
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 5.6e-149 531.2 323 83.3
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 2.1e-148 529.3 323 83.0
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 5.3e-147 524.6 323 82.0
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 2.9e-145 518.8 323 81.1
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 4.9e-145 518.1 324 82.1
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 4.9e-137 491.5 322 74.5
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 5.1e-134 481.5 324 74.4
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 4.3e-133 478.4 320 73.8
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.3e-132 476.9 323 74.0
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 1.6e-132 476.5 320 72.8
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.8e-131 473.0 325 73.5
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.8e-131 473.0 323 73.7
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 4.1e-131 471.9 320 72.5
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 6.9e-131 471.1 324 73.5
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 9.0e-131 470.7 324 72.2
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 3.8e-129 465.3 324 71.6
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.1e-128 463.8 322 73.3
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 2.5e-128 462.6 322 72.0
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.2e-128 462.2 321 71.7
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 5.5e-128 461.5 322 73.0
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 5.5e-128 461.5 322 71.4
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 5.5e-128 461.5 321 72.6
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 7.9e-127 457.6 326 70.2
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.0e-126 457.2 321 72.0
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.3e-126 456.1 327 71.3
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 3.0e-126 455.7 327 70.9
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 5.1e-126 454.9 331 68.9
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.5e-125 453.4 325 72.3
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.5e-125 453.4 324 70.4
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.9e-125 453.0 322 70.8
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 1.9e-125 453.0 324 70.4
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 4.3e-125 451.8 322 69.3
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 4.3e-125 451.8 324 69.4
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 7.4e-125 451.1 321 70.4
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 9.7e-125 450.7 323 70.9
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.6e-124 449.9 324 71.3
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.8e-124 449.1 327 69.7
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 3.7e-124 448.7 325 69.5
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 6.3e-124 448.0 320 68.8
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 6.3e-124 448.0 323 70.6
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 6.3e-124 448.0 350 68.6
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 8.2e-124 447.6 327 69.1
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 8.2e-124 447.6 320 70.6
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.4e-123 446.8 323 70.3
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 1.8e-123 446.4 324 69.1
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.8e-123 446.4 361 64.3
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.8e-123 446.4 330 67.9
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 3.1e-123 445.7 326 68.4
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.5e-122 443.4 324 68.8
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 4.5e-122 441.8 325 68.3
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 4.5e-122 441.8 327 69.7
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 5.9e-122 441.4 322 71.7
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.3e-121 440.3 328 68.9
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 2.2e-121 439.5 329 68.1
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 3.8e-121 438.7 326 68.7
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 3.8e-121 438.7 323 67.8
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 5.0e-121 438.3 331 70.7
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 6.5e-121 438.0 324 67.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 8.5e-121 437.6 318 69.5
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.1e-120 437.2 326 68.4
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 1.1e-120 437.2 352 67.0
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 1.4e-120 436.8 325 67.1
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 1.4e-120 436.8 324 69.1
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 2.5e-120 436.0 329 69.3
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 3.2e-120 435.6 328 66.8
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 5.5e-120 434.9 325 66.5
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 5.5e-120 434.9 326 68.4
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.6e-119 431.8 326 69.6
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 4.6e-119 431.8 326 67.8
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 7.9e-119 431.0 326 69.3
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 7.9e-119 431.0 320 68.8
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.0e-118 430.6 288 74.0
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 1.4e-118 430.3 331 65.9
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.8e-118 429.9 326 66.6
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 2.3e-118 429.5 322 67.1
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 2.3e-118 429.5 322 67.1
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 3.0e-118 429.1 317 71.0
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 5.1e-118 428.3 322 69.9
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 6.7e-118 427.9 321 70.4
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 6.7e-118 427.9 322 69.9
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 8.8e-118 427.6 326 69.0
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 2.0e-117 426.4 320 67.5
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.6e-117 426.0 326 68.7
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.4e-117 425.2 325 68.0
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 7.4e-117 424.5 336 65.5
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.3e-116 423.7 336 65.5
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 1.7e-116 423.3 328 68.0
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 6.3e-116 421.4 337 65.0
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 8.2e-116 421.0 324 65.7
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.0e-113 414.1 321 66.0
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 7.2e-112 407.9 498 48.2
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 4.7e-111 405.2 323 65.9
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 3.7e-108 395.6 332 63.3
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 4.8e-108 395.2 287 69.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.3e-105 387.1 262 72.5
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 3.8e-105 385.6 286 68.2
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 6.1e-103 378.3 384 53.6
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 4.0e-102 375.6 265 71.7
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.2e-101 374.0 325 61.2
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 4.4e-93 345.5 185 93.0
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.2e-90 337.4 178 96.1
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 4.1e-83 312.4 270 57.8
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 7.0e-83 311.6 190 80.5
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.6e-81 305.1 208 73.1
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 8.6e-81 304.7 303 52.5
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.0e-78 296.2 178 80.9
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 4.4e-77 292.4 168 84.5
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 9.2e-75 284.6 170 81.2
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.4e-70 270.8 184 74.5
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.6e-66 257.3 207 64.3
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.7e-65 253.8 216 64.8
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 8.1e-55 218.4 121 86.8
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.4e-54 217.6 137 73.7
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.1e-46 191.4 124 72.6
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.2e-46 189.1 121 76.9
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.7e-44 184.1 121 74.4
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.5e-40 171.0 115 72.2
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 9.0e-38 161.8 152 59.2
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.4e-35 154.5 121 67.8
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.3e-33 147.9 95 77.9
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 6.2e-23 112.5 75 72.0
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 4.3e-16 89.7 125 46.4
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 4.8e-15 86.3 158 38.0
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 1.9e-11 74.3 50 72.0
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 1.4e-09 68.2 185 25.9
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 5.7e-08 62.8 144 31.9
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.3e-07 61.6 142 31.7
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.7e-07 60.1 52 65.4
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 8.2e-07 58.9 176 29.5


User provided reference genes

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