Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 1.0e-99 366.7 183 100.0
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 2.3e-54 216.1 126 87.3
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 5.1e-54 214.9 126 86.5
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 4.3e-53 211.8 126 85.7
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 1.5e-50 203.4 126 82.5
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 7.6e-50 201.1 135 76.3
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 9.9e-50 200.7 126 80.2
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 3.8e-49 198.7 157 66.2
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 3.8e-49 198.7 157 66.2
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 8.4e-49 197.6 126 78.6
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 1.1e-48 197.2 146 69.2
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 1.8e-43 179.9 140 67.1
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 1.2e-42 177.2 126 70.6
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 3.4e-42 175.6 126 69.0
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 5.8e-42 174.9 126 68.3
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 1.3e-41 173.7 126 68.3
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 2.2e-41 172.9 126 68.3
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 3.8e-41 172.2 126 67.5
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 4.9e-41 171.8 126 69.0
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 8.4e-41 171.0 129 68.2
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 1.1e-40 170.6 126 66.7
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 1.9e-40 169.9 126 69.8
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 2.4e-40 169.5 130 63.1
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 3.2e-40 169.1 141 61.7
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 4.2e-40 168.7 126 66.7
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 4.2e-40 168.7 141 61.0
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 9.3e-40 167.5 126 66.7
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 1.2e-39 167.2 138 62.3
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 1.2e-39 167.2 126 66.7
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 2.1e-39 166.4 126 66.7
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 2.1e-39 166.4 126 67.5
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 2.1e-39 166.4 141 61.0
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 2.7e-39 166.0 131 62.6
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 2.7e-39 166.0 126 68.3
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 3.5e-39 165.6 148 56.8
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 4.6e-39 165.2 143 61.5
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 6.0e-39 164.9 143 61.5
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 7.8e-39 164.5 126 67.5
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 7.8e-39 164.5 126 67.5
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 7.8e-39 164.5 126 67.5
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 7.8e-39 164.5 126 67.5
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 1.0e-38 164.1 131 62.6
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 1.3e-38 163.7 148 57.4
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 1.7e-38 163.3 126 66.7
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 2.3e-38 162.9 126 66.7
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 3.9e-38 162.2 126 62.7
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 6.6e-38 161.4 126 64.3
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 6.6e-38 161.4 126 65.9
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 1.5e-37 160.2 134 60.4
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 2.5e-37 159.5 150 54.7
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 3.3e-37 159.1 149 53.7
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 3.3e-37 159.1 129 62.0
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 3.3e-37 159.1 126 61.1
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 4.3e-37 158.7 141 59.6
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 4.3e-37 158.7 132 62.9
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 5.6e-37 158.3 131 60.3
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 7.3e-37 157.9 126 64.3
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 7.3e-37 157.9 131 59.5
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 1.6e-36 156.8 126 63.5
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 1.6e-36 156.8 167 52.7
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 2.1e-36 156.4 127 63.0
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 4.8e-36 155.2 141 58.9
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 1.4e-35 153.7 131 58.0
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 1.4e-35 153.7 131 58.0
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 1.8e-35 153.3 126 62.7
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 1.8e-35 153.3 156 53.8
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 2.4e-35 152.9 98 78.6
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 3.1e-35 152.5 129 58.1
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 4.0e-35 152.1 127 59.1
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 4.0e-35 152.1 127 59.1
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 5.3e-35 151.8 126 59.5
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 1.2e-34 150.6 125 61.6
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 1.5e-34 150.2 139 58.3
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 2.6e-34 149.4 139 61.2
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 1.7e-33 146.7 126 61.1
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 1.7e-33 146.7 149 53.0
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 2.2e-33 146.4 125 58.4
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 2.9e-33 146.0 126 59.5
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 1.9e-32 143.3 123 56.9
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 4.2e-32 142.1 122 60.7
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 1.6e-31 140.2 131 56.5
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 1.6e-31 140.2 124 58.9
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 2.1e-31 139.8 151 54.3
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 2.3e-30 136.3 126 60.3
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 3.9e-30 135.6 94 73.4
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 5.1e-30 135.2 199 42.2
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 6.7e-30 134.8 144 54.2
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 8.7e-30 134.4 123 56.9
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 8.7e-30 134.4 103 66.0
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 1.9e-29 133.3 161 49.1
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 4.3e-29 132.1 126 52.4
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 7.4e-29 131.3 131 50.4
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 2.0e-26 123.2 97 62.9
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 2.6e-26 122.9 140 44.3
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 4.5e-26 122.1 125 48.0
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 2.4e-24 116.3 132 50.8
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 3.2e-24 115.9 123 48.0
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 7.1e-24 114.8 75 76.0
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 2.3e-22 109.8 109 49.5
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 2.3e-22 109.8 127 44.9
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 4.9e-17 92.0 64 75.0
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 8.4e-17 91.3 64 73.4
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 1.1e-11 74.3 63 57.1
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 7.9e-07 58.2 41 68.3


User provided reference genes

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