Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G146000 Glycine max HOM05D000003 ORTHO05D000004 1.4e-50 202.6 100 100.0
Lalb_Chr13g0303801 Lupinus albus HOM05D000003 ORTHO05D000004 3.4e-12 75.1 68 55.9
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 4.2e-10 68.2 68 50.0
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 9.3e-10 67.0 60 51.7
Medtr6g462100 Medicago truncatula HOM05D009299 ORTHO05D000022 1.2e-09 66.6 64 48.4
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 1.6e-09 66.2 60 51.7
Lalb_Chr02g0151641 Lupinus albus HOM05D000003 ORTHO05D000004 2.7e-09 65.5 60 53.3
Atru.chr7.889 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-08 63.2 67 47.8
Medtr0032s0260 Medicago truncatula HOM05D000003 ORTHO05D000006 1.3e-08 63.2 72 43.1
Glyma.20G195450 Glycine max HOM05D000003 ORTHO05D000004 1.8e-08 62.8 66 45.5
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 5.1e-08 61.2 60 48.3
RcHm_v2.0_Chr5g0074731 Rosa chinensis HOM05D000003 ORTHO05D000004 1.9e-07 59.3 62 45.2
TPR.G12236 Trifolium pratense HOM05D000003 ORTHO05D000004 1.9e-07 59.3 56 44.6
Psat5g248760 Pisum sativum HOM05D000003 ORTHO05D000004 3.3e-07 58.5 65 40.0
Atru.chr1.2293 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-07 58.2 70 48.6
Atru.chr13.2204 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-07 58.2 61 49.2
Atru.chr4.574 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-07 58.2 70 48.6
Medtr8g015630 Medicago truncatula HOM05D000003 ORTHO05D000004 4.3e-07 58.2 86 38.4
Psat0s1545g0080 Pisum sativum HOM05D000003 ORTHO05D000004 4.3e-07 58.2 66 42.4
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 5.7e-07 57.8 70 38.6
Atru.chr3.1942 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-07 57.4 70 48.6
Atru.chr4.468 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-07 57.0 59 42.4
FvH4_6g09211 Fragaria vesca HOM05D000003 ORTHO05D000651 9.6e-07 57.0 70 40.0
Atru.chr3.1667 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 70 48.6
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 1.6e-06 56.2 56 41.1
Aqoxy1G02953 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-06 55.8 67 41.8
TPR.G27265 Trifolium pratense HOM05D000003 ORTHO05D000004 2.1e-06 55.8 56 42.9
Lalb_Chr12g0209791 Lupinus albus HOM05D000003 ORTHO05D000004 2.8e-06 55.5 41 63.4
RcHm_v2.0_Chr1g0357231 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-06 55.5 62 41.9
Atru.chr12.1874 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-06 55.1 61 47.5
Aqoxy1G03637 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-06 54.3 66 42.4
TPR.G31611 Trifolium pratense HOM05D000003 ORTHO05D000004 8.2e-06 53.9 68 39.7


User provided reference genes

Program Settings