Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 4.0e-67 258.1 140 100.0
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 3.5e-55 218.4 97 96.9
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 2.0e-50 202.6 97 88.7
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.0e-46 188.7 97 81.4
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 5.1e-46 188.0 97 79.4
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 4.3e-45 184.9 97 79.4
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 1.6e-44 183.0 97 77.3
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 3.6e-44 181.8 97 78.4
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 3.6e-44 181.8 97 77.3
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.1e-43 180.3 97 76.3
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.1e-43 180.3 97 76.3
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.1e-43 180.3 97 76.3
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.8e-43 179.5 97 77.3
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 3.1e-43 178.7 97 76.3
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 5.2e-43 177.9 97 77.3
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 6.9e-43 177.6 97 76.3
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 2.0e-42 176.0 97 76.3
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 2.6e-42 175.6 95 77.9
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 3.4e-42 175.3 97 73.2
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 3.4e-42 175.3 97 78.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 4.4e-42 174.9 97 77.3
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 7.6e-42 174.1 97 76.3
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.3e-41 173.3 97 76.3
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 1.3e-41 173.3 97 75.3
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 1.3e-41 173.3 97 75.3
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 1.3e-41 173.3 97 75.3
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 2.2e-41 172.6 97 74.2
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.9e-41 172.2 97 74.2
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 6.4e-41 171.0 97 71.1
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 6.4e-41 171.0 97 71.1
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 8.4e-41 170.6 97 77.3
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.1e-40 170.2 97 73.2
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.4e-40 169.9 97 74.2
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 1.4e-40 169.9 97 78.4
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.9e-40 169.5 97 73.2
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 4.2e-40 168.3 97 73.2
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 4.2e-40 168.3 97 72.2
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 4.2e-40 168.3 97 77.3
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 7.1e-40 167.5 97 77.3
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 7.1e-40 167.5 97 77.3
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 7.1e-40 167.5 88 80.7
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 7.1e-40 167.5 97 70.1
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 9.3e-40 167.2 97 74.2
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 9.3e-40 167.2 97 69.1
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.2e-39 166.8 97 76.3
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 1.2e-39 166.8 97 72.2
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 1.6e-39 166.4 97 72.2
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 1.6e-39 166.4 97 71.1
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 2.1e-39 166.0 97 76.3
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 2.1e-39 166.0 97 73.2
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.1e-39 166.0 97 70.1
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 2.7e-39 165.6 97 76.3
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 2.7e-39 165.6 97 76.3
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 2.7e-39 165.6 97 76.3
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 2.7e-39 165.6 97 76.3
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 2.7e-39 165.6 97 76.3
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 2.7e-39 165.6 97 71.1
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 3.5e-39 165.2 97 73.2
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.5e-39 165.2 97 69.1
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 6.0e-39 164.5 97 69.1
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 6.0e-39 164.5 97 74.2
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.0e-38 163.7 97 73.2
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.3e-38 163.3 97 68.0
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 2.3e-38 162.5 97 74.2
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 2.3e-38 162.5 97 68.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 8.7e-38 160.6 97 68.0
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.1e-37 160.2 97 71.1
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 1.9e-37 159.5 97 69.1
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 3.3e-37 158.7 97 69.1
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 7.3e-37 157.5 97 64.9
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.3e-36 156.8 84 78.6
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.3e-36 156.8 97 72.2
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 2.1e-36 156.0 97 66.0
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 2.1e-36 156.0 97 66.0
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 2.1e-36 156.0 97 66.0
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 4.0e-35 151.8 98 64.3
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 5.3e-35 151.4 97 61.9
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 6.9e-35 151.0 97 67.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 6.9e-35 151.0 97 66.0
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 6.9e-35 151.0 97 66.0
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.0e-34 149.4 93 66.7
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 2.0e-34 149.4 97 60.8
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.3e-33 146.7 98 62.2
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 1.1e-32 143.7 131 50.4
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 5.4e-32 141.4 98 63.3
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.8e-30 136.3 97 59.8
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 3.0e-30 135.6 97 58.8
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 3.9e-30 135.2 85 70.6
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 8.7e-30 134.0 97 60.8
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 8.7e-30 134.0 97 60.8
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.8e-28 129.0 70 75.7
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 4.8e-28 128.3 108 53.7
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 3.1e-27 125.6 167 40.7
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.3e-25 120.2 95 57.9
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 1.1e-21 107.1 58 79.3
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 1.4e-19 100.1 97 52.6
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 1.2e-18 97.1 95 48.4
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 4.6e-15 85.1 95 44.2
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 2.8e-12 75.9 37 81.1
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 9.0e-11 70.9 31 90.3
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 1.0e-06 57.4 79 34.2
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 1.8e-06 56.6 76 35.5
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 6.7e-06 54.7 76 34.2
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 8.7e-06 54.3 81 35.8


User provided reference genes

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